Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:4741620:4762863 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4762863, End: 4763390, Length: 528

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010086:871723:877856877856878383528Burkholderia multivorans ATCC 17616 chromosome 2, completeHMG-I and HMG-Y DNA-binding domain protein5e-27120
NC_010805:1576735:159692115969211597448528Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu5a transposase5e-27120
NC_011000:3514338:356145435614543561978525Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transposase1e-24112
NC_010087:265625:275834275834276358525Burkholderia multivorans ATCC 17616 chromosome 3, completeHMG-I and HMG-Y DNA-binding domain protein2e-24111
NC_010801:629347:648499648499649023525Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu6b transposase2e-24111
NC_016590:548312:559443559443559970528Burkholderia sp. YI23 chromosome 3, complete sequencetransposase IS3/IS911 family protein1e-22105
NC_007103:291000:308042308042308560519Bacillus cereus E33L plasmid pE33L466, complete sequencetransposase, possible orfA ISRSO11-related3e-1890.9
NC_011772:1575674:159144115914411591959519Bacillus cereus G9842, complete genometransposase4e-1890.5
NC_009138:467268:512640512640513173534Herminiimonas arsenicoxydans, complete genomeputative insertion sequence CDS (ORFA)9e-1889.7
NC_007005:3199820:322431132243113224826516Pseudomonas syringae pv. syringae B728a, complete genomeISPsy8, transposase OrfA9e-1889.4
NC_014718:102852:108316108316108939624Burkholderia rhizoxinica HKI 454 chromosome, complete genomeTransposase1e-1789.4
NC_011000:183928:191130191130191654525Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transposase1e-1686.3
NC_015275:654959:669678669678670256579Clostridium lentocellum DSM 5427 chromosome, complete genometransposase IS3/IS911 family protein1e-1685.5
NC_014500:2688095:270154727015472702068522Dickeya dadantii 3937 chromosome, complete genomeISEch2 OrfA8e-1683.2
NC_016818:3986570:398971639897163990222507Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-1582
NC_015278:1960774:197262519726251973176552Aerococcus urinae ACS-120-V-Col10a chromosome, complete genometransposase2e-1479
NC_014376:3547218:355902935590293559592564Clostridium saccharolyticum WM1 chromosome, complete genometransposase IS3/IS911 family protein5e-1477
NC_009524:1796000:180937118093711809913543Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein2e-1375.5
NC_008150:1147883:115371711537171154253537Yersinia pestis Antiqua, complete genomeinsertion element IS1661 DNA-binding protein1e-1272.4
NC_004337:3590323:369261536926153693283669Shigella flexneri 2a str. 301, complete genomeIS150 ORF1(ORF A)7e-1270.1
NC_008258:3581583:359822535982253598854630Shigella flexneri 5 str. 8401, complete genomeIS150 ORF1(ORF A)8e-1269.7
NC_011898:2509267:252617725261772526755579Clostridium cellulolyticum H10, complete genometransposase IS3/IS911 family protein1e-1168.9
NC_015978:1266196:127273012727301273266537Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein1e-1065.9
NC_015978:996933:102134510213451021848504Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein2e-1065.1
NC_004722:5057825:507660350766035077124522Bacillus cereus ATCC 14579, complete genomeTransposase1e-0962.4
NC_016802:2035723:204994320499432050425483Corynebacterium diphtheriae HC02 chromosome, complete genometransposase-like protein2e-0961.6
NC_015978:996933:101166810116681012171504Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein5e-0960.8
NC_002935:1534889:154145815414581541940483Corynebacterium diphtheriae NCTC 13129, complete genomePutative insertion element DNA-binding protein5e-0960.5
NC_002935:1534889:154711015471101547592483Corynebacterium diphtheriae NCTC 13129, complete genomePutative insertion element DNA-binding protein5e-0960.5
NC_016786:2017267:203375220337522034234483Corynebacterium diphtheriae HC01 chromosome, complete genometransposase-like protein1e-0859.7
NC_009617:2355662:236134423613442361838495Clostridium beijerinckii NCIMB 8052 chromosome, complete genometransposase IS3/IS911 family protein1e-0859.3
NC_008253:3941938:395483539548353955068234Escherichia coli 536, complete genomehypothetical protein3e-0754.7
NC_018528:1932000:196217019621701962703534Lactobacillus helveticus R0052 chromosome, complete genometransposase9e-0753.1
NC_011751:1714131:172913317291331729663531Escherichia coli UMN026 chromosome, complete genometransposase ORF A, IS13972e-0651.6
NC_011750:2928990:296100529610052961535531Escherichia coli IAI39 chromosome, complete genometransposase ORF A, IS13972e-0651.6