Pre_GI: BLASTP Hits

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Query: NC_007951:4608560:4619027 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4619027, End: 4620091, Length: 1065

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017075:3165858:3183284318328431843091026Rubrivivax gelatinosus IL144, complete genomeputative methyltransferase2e-87322
NC_014618:1103239:1125572112557211273531782Enterobacter cloacae SCF1 chromosome, complete genomethymidylate synthase8e-81300
NC_010338:2136193:2147215214721521483181104Caulobacter sp. K31, complete genomethymidylate synthase2e-79296
NC_011083:4547825:458679945867994587779981Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,thymidylate synthase2e-69262
NC_009832:358291:371991371991372968978Serratia proteamaculans 568, complete genomethymidylate synthase1e-63243
NC_018678:87064:870648706488053990Alteromonas macleodii str. 'English Channel 673' chromosome,thymidylate synthase8e-62237
NC_014623:7133149:7149404714940471504141011Stigmatella aurantiaca DW4/3-1 chromosome, complete genomethymidylate synthase2e-39163
NC_020410:495184:5286605286605296701011Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completePutative thymidylate synthase3e-39162
NC_009725:496443:5460675460675470771011Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-38160
NC_016109:3591401:363480536348053635773969Kitasatospora setae KM-6054, complete genomeputative methyltransferase1e-28127
NC_007908:1108494:1135163113516311362061044Rhodoferax ferrireducens T118, complete genomethymidylate synthase5e-27122
NC_015311:2626850:263613226361322637130999Prevotella denticola F0289 chromosome, complete genomethymidylate synthase3e-1892.8
NC_011027:303000:3118543118543128851032Chlorobaculum parvum NCIB 8327, complete genomethymidylate synthase8e-1788.2
NC_019897:3669888:369100236910023691817816Thermobacillus composti KWC4 chromosome, complete genomethymidylate synthase2e-1687
NC_008255:1500067:150443015044301505224795Cytophaga hutchinsonii ATCC 33406, complete genomethymidylate synthetase2e-1687
NC_010830:1794559:179737917973791798173795Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1687
NC_009725:2072475:210343621034362104230795Bacillus amyloliquefaciens FZB42, complete genomeThyB4e-1685.9
NC_019842:2134803:216145921614592162253795Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,thymidylate synthase4e-1685.9
NC_009615:4563831:457017345701734570967795Parabacteroides distasonis ATCC 8503 chromosome, complete genomethymidylate synthase1e-1584.7
NC_010694:3055403:307420630742063075000795Erwinia tasmaniensis, complete genomeThymidylate synthase1e-1584.3
NC_014448:803106:816286816286817146861Mycoplasma hyorhinis HUB-1 chromosome, complete genomeThymidylate synthase 21e-1584.3
NC_015673:397947:416598416598417434837Corynebacterium resistens DSM 45100 chromosome, complete genomeThymidylate synthase2e-1583.6
NC_012559:731859:753803753803754597795Laribacter hongkongensis HLHK9, complete genomeTysY3e-1582.8
NC_007164:511171:528170528170528991822Corynebacterium jeikeium K411, complete genomehypothetical protein5e-1582.4
NC_014643:382500:398223398223399131909Rothia dentocariosa ATCC 17931 chromosome, complete genomethymidylate synthase5e-1582.4
NC_017338:1419500:141950014195001420456957Staphylococcus aureus subsp. aureus JKD6159 chromosome, completethymidylate synthase8e-1581.6
NC_017343:1391124:139112413911241392080957Staphylococcus aureus subsp. aureus ECT-R 2, complete genomethymidylate synthase8e-1581.6
NC_013450:1446952:144695214469521447908957Staphylococcus aureus subsp. aureus ED98, complete genomethymidylate synthase8e-1581.6
NC_009632:1557122:155712215571221558078957Staphylococcus aureus subsp. aureus JH1 chromosome, completethymidylate synthase8e-1581.6
NC_009487:1557248:155724815572481558204957Staphylococcus aureus subsp. aureus JH9 chromosome, completethymidylate synthase8e-1581.6
NC_009782:1510396:151039615103961511352957Staphylococcus aureus subsp. aureus Mu3, complete genomethymidylate synthase8e-1581.6
NC_002758:1508996:150899615089961509952957Staphylococcus aureus subsp. aureus Mu50, complete genomethymidylate synthase8e-1581.6
NC_002745:1432585:143258514325851433541957Staphylococcus aureus subsp. aureus N315, complete genomethymidylate synthase8e-1581.6
NC_003923:1436139:143613914361391437095957Staphylococcus aureus subsp. aureus MW2, complete genomethymidylate synthase8e-1581.6
NC_002953:1464693:146469314646931465649957Staphylococcus aureus subsp. aureus MSSA476, complete genomethymidylate synthase8e-1581.6
NC_017337:1478448:147844814784481479404957Staphylococcus aureus subsp. aureus ED133 chromosome, completethymidylate synthase9e-1581.6
NC_017351:1464209:146420914642091465165957Staphylococcus aureus subsp. aureus 11819-97 chromosome, completethymidylate synthase8e-1581.6
NC_007795:1370500:137068913706891371645957Staphylococcus aureus subsp. aureus NCTC 8325, complete genomethymidylate synthase, putative8e-1581.6
NC_017347:1483163:148316314831631484119957Staphylococcus aureus subsp. aureus T0131 chromosome, completeThymidylate synthase8e-1581.6
NC_017342:1848031:188673418867341887690957Staphylococcus aureus subsp. aureus TCH60 chromosome, completethymidylate synthase8e-1581.6
NC_017341:1482882:148288214828821483838957Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,thymidylate synthase8e-1581.6
NC_016928:1440319:144031914403191441275957Staphylococcus aureus subsp. aureus M013 chromosome, completeThymidylate synthase8e-1581.6
NC_016912:1374351:137435113743511375307957Staphylococcus aureus subsp. aureus VC40 chromosome, completethymidylate synthase8e-1581.6
NC_009641:1470500:147064514706451471601957Staphylococcus aureus subsp. aureus str. Newman chromosome,thymidylate synthase8e-1581.6
NC_002952:1497785:149778514977851498741957Staphylococcus aureus subsp. aureus MRSA252, complete genomethymidylate synthase8e-1581.6
NC_007793:1451409:145140914514091452365957Staphylococcus aureus subsp. aureus USA300, complete genomethymidylate synthase8e-1581.6
NC_007622:1397407:139808613980861399042957Staphylococcus aureus RF122, complete genomethymidylate synthase8e-1581.6
NC_010079:1465356:146535614653561466312957Staphylococcus aureus subsp. aureus USA300_TCH1516, completethymidylate synthase8e-1581.6
NC_002951:1474465:147446514744651475421957Staphylococcus aureus subsp. aureus COL, complete genomethymidylate synthase8e-1581.6
NC_015222:983647:997256997256998050795Nitrosomonas sp. AL212 chromosome, complete genomethymidylate synthase2e-1480.1
NC_008212:1685367:1699488169948817004981011Haloquadratum walsbyi DSM 16790, complete genomethymidylate synthase2e-1480.1
NC_012590:850130:865891865891866697807Corynebacterium aurimucosum ATCC 700975, complete genomeThymidylate synthase3e-1479.7
NC_013721:430000:433798433798434670873Gardnerella vaginalis 409-05, complete genomethymidylate synthase3e-1479.7
NC_020244:1875834:190783219078321908671840Bacillus subtilis XF-1, complete genomethymidylate synthase5e-1479
NC_009438:1282022:129002312900231290817795Shewanella putrefaciens CN-32 chromosome, complete genomethymidylate synthase5e-1479
NC_008750:3435495:344200634420063442800795Shewanella sp. W3-18-1, complete genomeThymidylate synthase5e-1479
NC_017195:1852935:188426818842681885107840Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completethymidylate synthase5e-1479
NC_016941:1411500:141304414130441414000957Staphylococcus aureus subsp. aureus MSHR1132, complete genomethymidylate synthase5e-1479
NC_007973:2773427:279365327936532794447795Ralstonia metallidurans CH34 chromosome 1, complete sequencethymidylate synthase6e-1478.6
NC_019896:2158223:216657421665742167413840Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completethymidylate synthase6e-1478.6
NC_014976:17909:282302823029069840Bacillus subtilis BSn5 chromosome, complete genomethymidylate synthase6e-1478.6
NC_013199:1407742:140774214077421408512771Lactobacillus rhamnosus Lc 705, complete genomethymidylate Synthase8e-1478.2
NC_021182:2360500:238111323811132381904792Clostridium pasteurianum BC1, complete genomethymidylate synthase1e-1377.8
NC_002935:781172:797640797640798452813Corynebacterium diphtheriae NCTC 13129, complete genomethymidylate synthase1e-1377.8
NC_015683:732668:744445744445745242798Corynebacterium ulcerans BR-AD22 chromosome, complete genomeThymidylate synthase2e-1377
NC_006322:1959918:197495519749551975794840Bacillus licheniformis ATCC 14580, complete genomethymidylate synthase3e-1376.6
NC_020388:1479568:1547848154784815488761029Natronomonas moolapensis 8.8.11 complete genomethymidylate synthase4e-1375.9
NC_016516:1751336:176914117691411769953813Propionibacterium acnes TypeIA2 P.acn33 chromosome, completethymidylate synthase4e-1375.9
NC_016047:1978312:200353120035312004370840Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completethymidylate synthase6e-1375.5
NC_014479:1831404:185708618570861857925840Bacillus subtilis subsp. spizizenii str. W23 chromosome, completethymidylate synthase7e-1375.1
NC_014330:2409559:242716224271622427962801Brachyspira pilosicoli 95/1000 chromosome, complete genomethymidylate synthase4e-1272.8
NC_019908:852230:852230852230853030801Brachyspira pilosicoli P43/6/78 chromosome, complete genomethymidylate synthase4e-1272.8
NC_018607:1134900:115091411509141151714801Brachyspira pilosicoli B2904 chromosome, complete genomethymidylate synthase4e-1272.8
NC_018604:1329228:134523913452391346039801Brachyspira pilosicoli WesB complete genomethymidylate synthase4e-1272.8
NC_018720:1611213:163199016319901632865876Bifidobacterium asteroides PRL2011 chromosome, complete genomethymidylate synthase4e-1272.8
NC_014039:1766049:178028117802811781093813Propionibacterium acnes SK137 chromosome, complete genomethymidylate synthase4e-1272.4
NC_017191:1173989:131039413103941311233840Bacillus amyloliquefaciens XH7 chromosome, complete genomethymidylate synthase5e-1272.4
NC_017188:1172181:130881713088171309656840Bacillus amyloliquefaciens TA208 chromosome, complete genomethymidylate synthase5e-1272.4
NC_017190:2130651:214734021473402148179840Bacillus amyloliquefaciens LL3 chromosome, complete genomeThymidylate synthase 17e-1272
NC_009512:5632591:566835056683505669183834Pseudomonas putida F1, complete genomeThymidylate synthase1e-1170.9
NC_009637:602079:627482627482628114633Methanococcus maripaludis C7 chromosome, complete genomethymidylate synthase3e-1169.7
NC_002677:1822500:183302618330261833826801Mycobacterium leprae TN, complete genomethymidylate synthase4e-1169.3
NC_000909:446364:452282452282452950669Methanocaldococcus jannaschii DSM 2661, complete genomethymidylate synthase1e-1067.4
NC_015847:1418036:144342514434251444057633Methanococcus maripaludis XI chromosome, complete genomethymidylate synthase2e-1067
NC_005791:1334880:135909413590941359732639Methanococcus maripaludis S2, complete genomethymidylate synthase2e-1067
NC_009135:168500:168525168525169157633Methanococcus maripaludis C5, complete genomeThymidylate synthase1e-0964.7
NC_009635:1067334:108291810829181083586669Methanococcus aeolicus Nankai-3 chromosome, complete genomethymidylate synthase1e-0964.3
NC_013887:245236:273284273284273952669Methanocaldococcus sp. FS406-22 chromosome, complete genomethymidylate synthase, methanogen type1e-0860.8
NC_015875:646000:665171665171666010840Streptococcus pseudopneumoniae IS7493 chromosome, complete genomethymidylate synthase2e-0757.4
NC_014494:614809:634233634233635072840Streptococcus pneumoniae AP200 chromosome, complete genomethymidylate synthase2e-0757
NC_008533:592000:608738608738609577840Streptococcus pneumoniae D39, complete genomethymidylate synthase2e-0757
NC_003098:586941:601207601207602046840Streptococcus pneumoniae R6, complete genomethymidylate synthase2e-0757
NC_010582:620400:634117634117634956840Streptococcus pneumoniae CGSP14, complete genomethymidylate synthase2e-0757
NC_012466:590883:606773606773607612840Streptococcus pneumoniae JJA, complete genomethymidylate synthase3e-0756.6
NC_008435:2368000:237133223713322371937606Rhodopseudomonas palustris BisA53, complete genomeThymidylate synthase1e-0654.3