Pre_GI: BLASTP Hits

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Query: NC_007948:517893:533902 Polaromonas sp. JS666, complete genome

Start: 533902, End: 534492, Length: 591

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012914:1923500:193114719311471931740594Paenibacillus sp. JDR-2, complete genometranscriptional regulator, TetR family3e-22104
NC_013947:373862:390307390307390966660Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family1e-2099.8
NC_015690:1348691:137475713747571375335579Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator5e-1890.5
NC_016935:1868839:189862518986251899203579Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator2e-1788.6
NC_018681:2985078:299752129975212998117597Nocardia brasiliensis ATCC 700358 chromosome, complete genometetr family transcriptional regulator2e-1788.6
NC_010170:1470755:148942714894271490008582Bordetella petrii, complete genometranscriptional regulator, TetR-family3e-1788.2
NC_014664:1669642:168504116850411685649609Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeregulatory protein TetR4e-1787.8
NC_008321:3189974:321189232118923212503612Shewanella sp. MR-4, complete genometranscriptional regulator, TetR family6e-1684
NC_013406:3521489:354052835405283541106579Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator2e-1582.4
NC_017195:709098:731324731324731908585Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYezE3e-1581.6
UCMB5137:1:265826583233576Bacillus atrophaeus UCMB-5137hypothetical protein1e-1479.3
NC_020244:747762:771062771062771679618Bacillus subtilis XF-1, complete genomeputative transcriptional regulator (TetR family)2e-1479
NC_009725:496443:514054514054514629576Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-1479
NC_015856:3832000:383402238340223834645624Collimonas fungivorans Ter331 chromosome, complete genomeTetR family transcriptional regulator2e-1478.6
NC_000964:732255:753154753154753738585Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-1478.2
NC_019897:73957:109118109118109699582Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator4e-1477.8
NC_016047:637778:653172653172653747576Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetranscriptional regulator TetR5e-1477.4
NC_015559:1478114:149093514909351491531597Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeTetR family transcriptional regulator5e-1477.4
NC_009720:3281000:329115032911503291818669Xanthobacter autotrophicus Py2, complete genomeTetR family transcriptional regulator9e-1476.6
NC_015759:760671:764668764668765258591Weissella koreensis KACC 15510 chromosome, complete genomeTerR family transcriptional regulator9e-1476.6
NC_016935:2503071:254529025452902545868579Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator9e-1476.6
NC_015690:1967244:201240220124022012980579Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator9e-1476.6
NC_016514:2079975:209723320972332097853621Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcfQ1e-1273.2
NC_010551:2537876:255936425593642559978615Burkholderia ambifaria MC40-6 chromosome 1, complete sequencetranscriptional regulator, TetR family1e-1272.8
NC_010804:2518695:253523025352302535865636Burkholderia multivorans ATCC 17616 chromosome 1, completeTetR family transcriptional regulator1e-1272.8
NC_010084:988908:988908988908989543636Burkholderia multivorans ATCC 17616 chromosome 1, completeTetR family transcriptional regulator1e-1272.8
NC_004605:1092476:111059311105931111168576Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative TetR-family2e-1272.4
NC_020418:3102460:310548531054853106096612Morganella morganii subsp. morganii KT, complete genomeTranscriptional regulator, TetR family2e-1272
NC_007510:2805121:281997328199732820587615Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, TetR family3e-1271.6
NC_020063:3690308:371432137143213714902582Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator5e-1270.9
NC_014838:589581:608819608819609418600Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, TetR family6e-1270.9
NC_016582:11380000:113875491138754911388190642Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator7e-1270.5
NC_008542:2631138:265003426500342650657624Burkholderia cenocepacia HI2424 chromosome 1, complete sequencetranscriptional regulator, TetR family8e-1270.5
NC_008060:1945597:196449319644931965116624Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetranscriptional regulator, TetR family8e-1270.5
NC_009142:5519208:552635655263565526955600Saccharopolyspora erythraea NRRL 2338, complete genomeTetR-family transcriptional regulator2e-1169.3
NC_013037:2851940:288141928814192882000582Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, TetR family4e-1168.2
NC_014659:2737843:273784327378432738469627Rhodococcus equi 103S, complete genomeTetR family transcriptional regulator5e-1167.4
NC_010002:4326509:432650943265094327135627Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family7e-1167
NC_015690:6595395:660548766054876606074588Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYezE8e-1167
NC_015563:3203012:325163832516383252264627Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR1e-1066.6
NC_013169:805124:815286815286815897612Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator1e-1066.2
NC_016641:2291363:231364123136412314216576Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator1e-1066.2
NC_015856:3059737:307258730725873073210624Collimonas fungivorans Ter331 chromosome, complete genomeTetR family transcriptional regulator5e-1064.3
NC_007802:1991211:201816420181642018751588Jannaschia sp. CCS1, complete genometranscriptional regulator, TetR family7e-1063.9
NC_017186:2252438:225417822541782254768591Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator1e-0963.2
NC_014318:2252417:225415722541572254747591Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator1e-0963.2
NC_002927:1292573:129502512950251295645621Bordetella bronchiseptica RB50, complete genomeputative TetR-family transcriptional regulator1e-0963.2
NC_010815:40357:575715757158143573Geobacter lovleyi SZ plasmid pGLOV01, complete sequencetranscriptional regulator, TetR family1e-0962.8
NC_002927:4392768:441134744113474411967621Bordetella bronchiseptica RB50, complete genomeputative TetR-family transcriptional regulator2e-0962.8
NC_014153:2125551:213126221312622131957696Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, TetR family4e-0961.2
NC_016582:11672500:116874191168741911688027609Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator7e-0960.5
NC_007492:3384077:339444033944403395021582Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family9e-0960.1
NC_014623:9492000:949227594922759492889615Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeTetR family transcriptional regulator8e-0960.1
NC_021066:3028421:304263130426313043224594Raoultella ornithinolytica B6, complete genomeTetR family transcriptional regulator1e-0859.7
NC_020063:2077233:208847920884792089114636Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator2e-0858.5
NC_014258:355845:365469365469366095627Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional repressor AcnR4e-0857.8
NC_014659:4908182:491490549149054915444540Rhodococcus equi 103S, complete genomeTetR family transcriptional regulator5e-0857.8
NC_015709:1769806:178428217842821784989708Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator5e-0857.4
NC_012968:1191037:120075812007581201360603Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family7e-0857
NC_009720:3281000:329541232954123295720309Xanthobacter autotrophicus Py2, complete genomeregulatory protein, TetR2e-0755.8
NC_014841:41773:551085510855716609Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, TetR family3e-0755.1
NC_013235:5127148:513109951310995131689591Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, TetR family4e-0754.7
NC_010410:3719599:374375137437513744401651Acinetobacter baumannii AYE, complete genomeputative regulator (TetR/AcrR family)5e-0754.3
NC_021177:2241647:224302222430222243660639Streptomyces fulvissimus DSM 40593, complete genomeTetR family transcriptional regulator5e-0754.3
NC_014306:4901390:491379349137934914401609Erwinia billingiae Eb661, complete genomeTranscriptional regulator, TetR family6e-0753.9
NC_006905:1766000:178046117804611781051591Salmonella enterica subsp. enterica serovar Choleraesuis strputative bacterial regulatory helix-turn-helix proteins, araC family8e-0753.5
NC_009142:6086000:608623460862346086818585Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulatory protein9e-0753.5
NC_009142:5459819:546278154627815463392612Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, TetR family3e-0651.6