Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4671121 Polaromonas sp. JS666, complete genome

Start: 4671121, End: 4672605, Length: 1485

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015724:339500:3523083523083537681461Cupriavidus necator N-1 plasmid BB2p, complete sequenceopine oxidase subunit A4e-179627
NC_007948:4620661:4641535464153546429561422Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region2e-154546
NC_007948:4646344:4660047466004746614231377Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region2e-89330
NC_015136:2282488:2324124232412423255151392Burkholderia sp. CCGE1001 chromosome 1, complete sequenceFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-84313
NC_007948:4558000:4578122457812245795131392Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region4e-76285
NC_011982:206784:2261742261742275681395Agrobacterium vitis S4 plasmid pTiS4, complete sequenceD-nopaline dehydrogenase7e-71268
NC_003037:1245645:1245645124564512470211377Sinorhizobium meliloti 1021 plasmid pSymA, complete sequenceputative opine oxidase subunit5e-66252
NC_010676:2793237:2820879282087928222941416Burkholderia phytofirmans PsJN chromosome 2, complete sequenceBFD domain protein (2Fe-2S)-binding domain protein8e-61234
NC_011883:2031222:2031523203152320329111389Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,BFD domain protein (2Fe-2S)-binding domain protein4e-59229
NC_003308:1:2827328273296911419Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceD-nopaline dehydrogenase2e-50200
NC_003065:27163:6167661676630941419Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencenopaline oxidase subunit A2e-50200
NC_011144:2674242:2692785269278526941431359Phenylobacterium zucineum HLK1, complete genomesarcosine oxidase, subunit alpha1e-47191
NC_007005:2686551:2709105270910527104961392Pseudomonas syringae pv. syringae B728a, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region2e-44181
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase5e-37155
NC_008391:2404443:2417162241716224186071446Burkholderia cepacia AMMD chromosome 2, complete sequenceBFD domain protein (2Fe-2S)-binding domain protein6e-36152
NC_005773:5684000:5705088570508857064971410Pseudomonas syringae pv. phaseolicola 1448A, complete genomepyridine nucleotide-disulphide oxidoreductase family protein2e-32140
NC_020291:5409587:5420695542069554222721578Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase8e-23108
NC_021184:2936244:2946110294611029477021593Desulfotomaculum gibsoniae DSM 7213, complete genomethioredoxin reductase2e-21103
NC_008027:5842740:5845435584543558468291395Pseudomonas entomophila L48, complete genomehydrogene cyanide synthase HcnB2e-20100
NC_007492:3954345:3994946399494639963551410Pseudomonas fluorescens PfO-1, complete genomeBFD-like (2Fe-2S)-binding region2e-1997.4
NC_015737:2691246:2691246269124626928201575Clostridium sp. SY8519, complete genomeNAD-dependent dehydrogenase5e-1996.3
NC_014815:4621552:4648390464839046497751386Micromonospora sp. L5 chromosome, complete genomebfd domain protein (2fe-2S)-binding domain protein3e-1893.6
NC_020829:809457:8094578094578107041248Pseudomonas denitrificans ATCC 13867, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase7e-1789
NC_014910:1912552:193251619325161932785270Alicycliphilus denitrificans BC chromosome, complete genome9e-1582
NC_015172:1075592:1106628110662811077281101Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-1480.9
NC_020064:1854589:1855942185594218572011260Serratia marcescens FGI94, complete genomeNAD(FAD)-dependent dehydrogenase2e-1377.4
NC_015566:1941407:1942781194278119440431263Serratia sp. AS12 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-1275.1
NC_000868:318434:3190643190643205091446Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit alpha6e-1272.8
NC_012483:3731542:3797136379713637984281293Acidobacterium capsulatum ATCC 51196, complete genomepyridine nucleotide-disulfide oxidoreductase1e-1171.6
NC_000961:1532245:1532245153224515336931449Pyrococcus horikoshii OT3, complete genomeD-nopaline dehydrogenase8e-1168.9
NC_013926:71186:8670186701881371437Aciduliprofundum boonei T469 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-1067.4
NC_020291:5409587:542035454203545420683330Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeNAD(P)H-nitrite reductase1e-0964.7
NC_013522:991649:101408410140841014410327Thermanaerovibrio acidaminovorans DSM 6589, complete genomeBFD domain protein (2Fe-2S)-binding domain protein3e-0963.9
NC_021184:2936244:294547029454702945820351Desulfotomaculum gibsoniae DSM 7213, complete genomeNAD(P)H-nitrite reductase8e-0962.4
NC_010623:1871492:1894975189497518964891515Burkholderia phymatum STM815 chromosome 2, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-0860.1
NC_010001:312500:312520312520313446927Clostridium phytofermentans ISDg, complete genomethioredoxin reductase4e-0859.7
NC_000961:1532245:153419315341931534459267Pyrococcus horikoshii OT3, complete genomehypothetical protein4e-0757
NC_014364:3001597:3025981302598130276391659Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase4e-0757
NC_015172:1075592:110586111058611106631771Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeBFD domain protein (2Fe-2S)-binding domain protein6e-0755.8
NC_017179:2539031:256246425624642563411948Clostridium difficile BI1, complete genomethioredoxin-disulfide reductase1e-0655.5
NC_013315:2531019:255445225544522555399948Clostridium difficile CD196 chromosome, complete genomethioredoxin reductase1e-0655.5
NC_013316:2623199:263500826350082635955948Clostridium difficile R20291, complete genomethioredoxin reductase1e-0655.5
NC_013522:991649:1014925101492510160161092Thermanaerovibrio acidaminovorans DSM 6589, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase1e-0655.1
NC_016641:2773757:2786959278695927881821224Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-0654.7
NC_013926:71186:859268592686207282Aciduliprofundum boonei T469 chromosome, complete genomeBFD domain protein (2Fe-2S)-binding domain protein3e-0653.5
NC_010321:562494:5701595701595716671509Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeFAD dependent oxidoreductase5e-0653.1
NC_014964:557910:5655755655755670831509Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeFAD dependent oxidoreductase5e-0653.1
NC_013521:4240468:4242478424247842434791002Sanguibacter keddieii DSM 10542, complete genomethioredoxin-disulfide reductase6e-0652.8
NC_008541:4679022:468538546853854686341957Arthrobacter sp. FB24 chromosome 1, complete sequencethioredoxin reductase8e-0652.4