Pre_GI: BLASTP Hits

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Query: NC_007604:1586243:1606129 Synechococcus elongatus PCC 7942, complete genome

Start: 1606129, End: 1606689, Length: 561

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:2683467:709970997659561Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V2e-75281
NC_015572:2186394:218769221876922188171480Methylomonas methanica MC09 chromosome, complete genomepeptidase S24/S26A/S26B3e-29127
NC_012108:442493:456512456512456931420Desulfobacterium autotrophicum HRM2, complete genomeUmuD11e-28125
NC_016002:2179969:218853921885392188967429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein4e-26117
NC_016002:1741109:175018817501881750616429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein4e-26117
NC_011881:1:390939094340432Arthrobacter chlorophenolicus A6 plasmid pACHL02, completepeptidase S24 and S26 domain protein7e-26116
NC_009927:253250:254670254670255101432Acaryochloris marina MBIC11017 plasmid pREB2, complete sequenceSOS mutagenesis protein UmuD, putative7e-25113
NC_015167:1154497:115575611557561156190435Cellulophaga lytica DSM 7489 chromosome, complete genomepeptidase S24/S26A/S26B1e-24112
NC_009453:36599:513145131451745432Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative UmuD-like protein2e-24111
NC_007516:1086948:110718511071851107616432Synechococcus sp. CC9605, complete genomeputative SOS mutagenesis protein UmuD2e-24111
NC_007626:2204767:224721922472192247689471Magnetospirillum magneticum AMB-1, complete genomeSOS-response transcriptional repressors4e-24110
NC_011761:1499500:151324615132461513740495Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeumuD protein1e-23109
NC_015410:2351464:238028123802812380712432Pseudomonas mendocina NK-01 chromosome, complete genomeprotein MucA4e-23107
NC_005071:671084:688212688212688706495Prochlorococcus marinus str. MIT 9313, complete genomeputative SOS mutagenesis protein UmuD1e-22105
NC_015970:19850:238292382924263435Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completepeptidase S24/S26A/S26B2e-22105
NC_014733:1223359:123140312314031231840438Methylovorus sp. MP688 chromosome, complete genomepeptidase s24 and s26 domain protein3e-22104
NC_014394:2577949:258904525890452589485441Gallionella capsiferriformans ES-2 chromosome, complete genomePeptidase S24/S26A/S26B, conserved region3e-22104
NC_012559:1497548:152788615278861528506621Laribacter hongkongensis HLHK9, complete genomeUmuD protein2e-21102
NC_008341:29038:461294612946572444Nitrosomonas eutropha C91 plasmid1, complete sequenceputative prophage repressor5e-21100
NC_010554:2646806:272478627247862725235450Proteus mirabilis HI4320, complete genomeDNA repair protein6e-21100
NC_016445:89500:106849106849107298450Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase V1e-2099.4
NC_012668:3037345:303929130392913039740450Vibrio cholerae MJ-1236 chromosome 1, complete sequenceerror-prone repair protein UmuD1e-2099.4
NC_006347:2190000:219226021922602192703444Bacteroides fragilis YCH46, complete genomeerror-prone repair: SOS-response transcriptional repressor UmuD homolog7e-2096.7
NC_016776:2237404:224094922409492241392444Bacteroides fragilis 638R, complete genomeputative UmuD/RumA DNA repair protein7e-2096.7
NC_003228:2245181:224994922499492250386438Bacteroides fragilis NCTC 9343, complete genomeputative UmuD/RumA DNA repair protein7e-2096.7
NC_014532:3596097:362965336296533630096444Halomonas elongata DSM 2581, complete genomehypothetical protein2e-1995.1
NC_008570:2216736:225027522502752250697423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeumuD protein3e-1994.7
NC_015703:4483500:451653045165304516979450Runella slithyformis DSM 19594 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region4e-1994.4
NC_012969:1574330:159093015909301591391462Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepeptidase S24 and S26 domain-containing protein6e-1994
NC_015566:3269469:328448832844883284913426Serratia sp. AS12 chromosome, complete genomepeptidase S24/S26A/S26B7e-1993.6
NC_009436:2056000:206974720697472070181435Enterobacter sp. 638, complete genomeprophage repressor7e-1993.6
NC_008740:1357312:136883113688311369268438Marinobacter aquaeolei VT8, complete genomeputative prophage repressor8e-1993.2
NC_011662:2320100:233366623336662334121456Thauera sp. MZ1T, complete genomepeptidase S24 and S26 domain protein3e-1891.7
NC_008570:1143578:116544011654401165883444Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuD5e-1890.5
NC_013282:1842412:184946718494671849934468Cronobacter turicensis, complete genomeProtein umuD6e-1890.5
NC_020260:1293860:130024713002471300684438Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuD6e-1890.1
NC_015424:3520783:355284035528403553283444Aeromonas veronii B565 chromosome, complete genomeprotein UmuD7e-1890.1
NC_010725:356609:361808361808362272465Methylobacterium populi BJ001, complete genomepeptidase S24 and S26 domain protein9e-1889.7
NC_016816:4129299:417061241706124171037426Pantoea ananatis LMG 5342, complete genomeUV protection protein9e-1889.7
NC_005966:2653945:267389626738962674522627Acinetobacter sp. ADP1, complete genomecomponent of DNA polymerase V1e-1789.4
NC_011757:276953:292315292315292770456Methylobacterium chloromethanicum CM4, complete genomepeptidase S24 and S26 domain protein1e-1686.3
NC_011894:4013830:401775640177564018211456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein2e-1685.5
NC_015424:2726223:276526527652652765627363Aeromonas veronii B565 chromosome, complete genomepeptidase S24-like domain-containing protein3e-1684.7
NC_007963:1552761:156563415656341566074441Chromohalobacter salexigens DSM 3043, complete genomeputative prophage repressor3e-1684.7
NC_010473:1245284:127023112702311270650420Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase V, subunit D3e-1684.7
NC_009801:1296488:132144813214481321867420Escherichia coli E24377A, complete genomeprotein UmuD3e-1684.7
NC_008253:1228485:125123812512381251657420Escherichia coli 536, complete genomeUmuD protein3e-1684.7
NC_011751:1446073:147704214770421477461420Escherichia coli UMN026 chromosome, complete genomeDNA polymerase V subunit UmuD3e-1684.7
NC_012967:1205985:123091712309171231336420Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase V subunit UmuD3e-1684.7
NC_004431:1443968:146808314680831468502420Escherichia coli CFT073, complete genomeUmuD protein3e-1684.7
NC_011742:1221416:124553912455391245958420Escherichia coli S88 chromosome, complete genomeDNA polymerase V subunit UmuD3e-1684.7
NC_011894:585637:622354622354622869516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein4e-1684.3
NC_016609:8251438:825282782528278253261435Niastella koreensis GR20-10 chromosome, complete genomeSOS response UmuD protein4e-1684.3
NC_008255:1701195:171908717190871719515429Cytophaga hutchinsonii ATCC 33406, complete genomepeptidase, S24 family, UV repair protein4e-1684.3
NC_011745:1287714:131060513106051311024420Escherichia coli ED1a chromosome, complete genomeDNA polymerase V subunit UmuD5e-1684
NC_014305:97055:112117112117112545429Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA polymerase V subunit5e-1684
NC_009648:1541699:159551215955121595931420Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA polymerase V subunit UmuD1e-1583.2
NC_011283:2836000:289026328902632890745483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD9e-1683.2
NC_006856:95830:100863100863101300438Salmonella enterica subsp. enterica serovar Choleraesuis strImpA8e-1683.2
NC_017047:1934430:194357819435781944000423Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase V subunit UmuD8e-1683.2
NC_007941:11319:558295582956266438Escherichia coli UTI89 plasmid pUTI89, complete sequenceUV protection and mutation protein1e-1582.8
NC_012988:4262631:426666942666694267061393Methylobacterium extorquens DM4, complete genomeDNA polymerase V subunit D1e-1582.4
NC_011283:3177350:318657131865713187053483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD2e-1582
NC_010510:534024:541392541392541844453Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completepeptidase S24 and S26 domain protein2e-1582
NC_014323:3976351:398335939833593983784426Herbaspirillum seropedicae SmR1 chromosome, complete genomeSOS mutagenesis protein4e-1581.3
NC_014304:77715:878618786188307447Erwinia billingiae Eb661 plasmid pEB102, complete sequenceProtein SamA4e-1581.3
NC_016810:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein3e-1581.3
NC_016856:2085283:209256820925682092987420Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit UmuD3e-1581.3
NC_016857:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit UmuD3e-1581.3
NC_016863:2029340:204076020407602041179420Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit UmuD3e-1581.3
NC_020064:1962172:197446219744621974884423Serratia marcescens FGI94, complete genomeSOS response transcriptional repressor, RecA-mediated autopeptidase5e-1580.9
NC_009512:5632591:565849256584925658920429Pseudomonas putida F1, complete genomeputative prophage repressor4e-1580.9
NC_021066:1778000:178527517852751785694420Raoultella ornithinolytica B6, complete genomeDNA polymerase V subunit UmuD4e-1580.9
NC_011601:1315746:133733613373361337755420Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA polymerase V subunit UmuD4e-1580.9
NC_004631:948054:981317981317981736420Salmonella enterica subsp. enterica serovar Typhi Ty2, completeUmuD protein6e-1580.5
NC_009436:2395913:240450524045052404924420Enterobacter sp. 638, complete genomeDNA polymerase V subunit UmuD7e-1580.1
NC_015731:2460248:246163624616362462241606Nitrosomonas sp. Is79A3 chromosome, complete genomepeptidase S24/S26A/S26B8e-1580.1
NC_013446:2961647:297934429793442979754411Comamonas testosteroni CNB-2, complete genomeDNA polymerase V1e-1479.7
NC_009792:1739970:174737317473731747789417Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1479.3
NC_016514:2476359:248828724882872488781495Enterobacter cloacae EcWSU1 chromosome, complete genomeUmuD2e-1479
NC_011894:5056901:507563950756395076154516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein2e-1478.6
NC_016830:3869572:387722238772223877647426Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuD4e-1477.8
NC_015761:1599000:160588716058871606315429Salmonella bongori NCTC 12419, complete genomeDNA repair protein4e-1477.8
NC_004129:5373886:542090954209095421361453Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein A6e-1477.4
NC_015222:2475792:249340424934042494024621Nitrosomonas sp. AL212 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region1e-1376.3
NC_014842:19411:458674586746373507Pantoea sp. At-9b plasmid pPAT9B05, complete sequencepeptidase S24/S26A/S26B2e-1375.1
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-1374.3
NC_007275:1:175717572182426Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeultraviolet light resistance protein A4e-1374.3
NC_011894:7109374:711828971182897118744456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein1e-1272.8
NC_009434:3611738:363139136313913631822432Pseudomonas stutzeri A1501, complete genomeultraviolet light resistance protein A8e-1270.1
NC_014910:1912552:191889019188901919375486Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein2e-1168.9
NC_013716:4306695:433331543333154333674360Citrobacter rodentium ICC168, complete genomeputative SOS response protein5e-1167.4
NC_007005:830467:840487840487840921435Pseudomonas syringae pv. syringae B728a, complete genomePeptidase S24, S26A and S26B9e-1166.6
NC_020911:1859210:188108418810841881518435Octadecabacter antarcticus 307, complete genomeUV-repair and mutation protein UmuD1e-1066.2
NC_007005:1605000:161250616125061612940435Pseudomonas syringae pv. syringae B728a, complete genomePeptidase S24, S26A and S26B1e-1066.2
NC_020541:1786500:180581018058101806289480Rhodanobacter sp. 2APBS1, complete genomeSOS response UmuD protein1e-1066.2
NC_007508:4476726:448566244856624486141480Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative polymerase V subunit1e-1065.9
NC_003902:3514000:352392035239203524399480Xanthomonas campestris pv. campestris str. ATCC 33913, completepolymerase V subunit3e-1064.7
NC_020418:2868000:288122828812282881533306Morganella morganii subsp. morganii KT, complete genomeError-prone repair protein UmuD1e-0963.2
NC_013730:2359939:239184123918412392086246Spirosoma linguale DSM 74, complete genomeSOS-response transcriptional repressors (RecA- mediated autopeptidase)-like protein1e-0859.7
NC_015851:10915:328603286033324465Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceSOS-response repressor and protease LexA1e-0859.7
NC_010172:3894652:389943338994333899633201Methylobacterium extorquens PA1, complete genomehypothetical protein1e-0859.3
NC_003197:2327474:233096123309612331431471Salmonella typhimurium LT2, complete genomeDNA polymerase V subunit6e-0857.4
NC_016810:2325190:232867723286772329147471Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase V subunit6e-0857.4
NC_016856:2379027:238251423825142382984471Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit6e-0857.4
NC_016857:2325190:232867723286772329147471Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit6e-0857.4
NC_016863:2324293:233070623307062331209504Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit7e-0857
NC_016860:2323017:232650423265042327175672Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase V subunit UmuD1e-0755.8
NC_010102:683444:714177714177714848672Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0755.8
NC_011083:2375061:237854823785482379219672Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA polymerase V subunit1e-0755.8
NC_009436:1141376:115397511539751154361387Enterobacter sp. 638, complete genomeDNA polymerase V subunit4e-0754.3
NC_009052:4168776:417661141766114177018408Shewanella baltica OS155, complete genomeputative prophage repressor8e-0753.5
NC_016901:5130147:515061851506185151025408Shewanella baltica OS678 chromosome, complete genomepeptidase S24/S26A/S26B3e-0651.2
NC_009665:5072413:509286950928695093276408Shewanella baltica OS185 chromosome, complete genomeputative prophage repressor3e-0651.2
NC_009997:5188221:520999652099965210403408Shewanella baltica OS195, complete genomepeptidase S24 and S26 domain protein3e-0651.2
NC_017986:5605197:563727956372795637887609Pseudomonas putida ND6 chromosome, complete genomeLexA repressor4e-0650.8
NC_010334:2615260:262260426226042623011408Shewanella halifaxensis HAW-EB4, complete genomepeptidase S24 and S26 domain protein6e-0650.4