Pre_GI: BLASTP Hits

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Query: NC_007492:3655545:3676891 Pseudomonas fluorescens PfO-1, complete genome

Start: 3676891, End: 3677331, Length: 441

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007517:1107408:112464211246421125103462Geobacter metallireducens GS-15, complete genomeAlkylhydroperoxidase AhpD core3e-42170
NC_008314:1559102:157362715736271574106480Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein9e-39158
NC_016047:683368:703740703740704183444Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completealkylhydroperoxidase AhpD core4e-36149
NC_008463:282565:319880319880320317438Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative decarboxylase5e-36149
NC_010515:1618093:162116716211671621646480Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencealkylhydroperoxidase like protein, AhpD family5e-36149
NC_008061:2548849:255193125519312552410480Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceAlkylhydroperoxidase AhpD core1e-35148
NC_008543:2696377:271457827145782715057480Burkholderia cenocepacia HI2424 chromosome 2, complete sequencealkylhydroperoxidase like protein, AhpD family1e-35148
NC_011963:1979136:199720819972081997681474Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceAlkylhydroperoxidase like protein, AhpD family3e-35146
NC_013929:7663631:767378176737817674260480Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein5e-34142
NC_016626:1825845:185297718529771853435459Burkholderia sp. YI23 plasmid byi_1p, complete sequencealkylhydroperoxidase2e-32137
NC_016609:4209000:421155742115574211994438Niastella koreensis GR20-10 chromosome, complete genomealkylhydroperoxidase1e-28125
NC_002927:1292573:130472313047231305172450Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-28124
NC_017249:263873:281754281754282263510Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-28123
NC_008786:1767315:177882417788241779258435Verminephrobacter eiseniae EF01-2, complete genomealkylhydroperoxidase like protein, AhpD family1e-27121
NC_020126:2216926:223202522320252232486462Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-27120
NC_014655:851381:865534865534865986453Leadbetterella byssophila DSM 17132 chromosome, complete genomealkylhydroperoxidase like protein, ahpd family9e-26115
NC_014966:795311:796355796355796792438Vibrio vulnificus MO6-24/O chromosome II, complete sequencehypothetical protein7e-26115
NC_004129:2440744:244341624434162443847432Pseudomonas fluorescens Pf-5, complete genomeUncharacterized ACR7e-26115
NC_016111:4003290:400329040032904003790501Streptomyces cattleya NRRL 8057, complete genomealkylhydroperoxidase3e-25113
NC_008700:1627401:163377116337711634241471Shewanella amazonensis SB2B, complete genomealkylhydroperoxidase like protein, AhpD family4e-25113
NC_015850:1850741:186661018666101867104495Acidithiobacillus caldus SM-1 chromosome, complete genomeYnjA5e-25112
NC_015851:89006:114470114470114892423Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceYnjA2e-24110
NC_008060:3155133:319621331962133196659447Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceAlkylhydroperoxidase AhpD core4e-22103
NC_003888:3138905:314018431401843140657474Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-21101
NC_003155:921494:940165940165940638474Streptomyces avermitilis MA-4680, complete genomehypothetical protein5e-2199.8
NC_015957:8845274:887212788721278872600474Streptomyces violaceusniger Tu 4113 chromosome, complete genomealkylhydroperoxidase like protein2e-1994.4
NC_016582:389729:396785396785397258474Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein6e-1786.3
NC_008699:857837:867901867901868410510Nocardioides sp. JS614, complete genomealkylhydroperoxidase like protein, AhpD family8e-1785.5
NC_006361:498305:514153514153514659507Nocardia farcinica IFM 10152, complete genomehypothetical protein9e-1682
NC_010545:236000:239202239202239690489Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein4e-1270.1
NC_019673:1584739:158546015854601586164705Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-1166.2
NC_002944:2373873:239735123973512397947597Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein8e-0855.8
NC_017904:2724941:272832327283232728961639Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein5e-0650.1