Pre_GI: BLASTP Hits

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Query: NC_007348:2519447:2533992 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Start: 2533992, End: 2534888, Length: 897

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010676:2621496:262535126253512626265915Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LysR family7e-109393
NC_005085:1498000:151770015177001518614915Chromobacterium violaceum ATCC 12472, complete genomeprobable transcriptional regulator2e-54212
NC_016002:1048420:105613310561331057047915Pseudogulbenkiania sp. NH8B, complete genomeLysR family transcriptional regulator3e-53209
NC_008700:1994829:199482919948291995719891Shewanella amazonensis SB2B, complete genometranscriptional regulator, LysR family2e-48192
NC_003910:4234000:426365242636524264587936Colwellia psychrerythraea 34H, complete genomesubstrate binding transcriptional regulator, LysR family1e-47190
NC_002516:1236644:123664412366441237546903Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator2e-47189
NC_018080:4280401:430315243031524304054903Pseudomonas aeruginosa DK2 chromosome, complete genometranscriptional regulator2e-47189
NC_008463:4389721:441238644123864413288903Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator9e-47187
NC_015556:819503:822306822306823226921Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, LysR family3e-44179
NC_004129:3965947:397820039782003979129930Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family1e-42173
NC_009832:3500000:351210535121053512998894Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family4e-42172
NC_009439:4913767:493332849333284934239912Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-34146
NC_015276:2948923:296983129698312970733903Marinomonas mediterranea MMB-1 chromosome, complete genometranscriptional regulator, LysR family3e-34145
NC_016612:28451:606586065861569912Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLysR family transcriptional regulator4e-31135
NC_016027:1902854:193643219364321937358927Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator9e-26117
NC_010682:2642269:265943626594362660344909Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, LysR family4e-25115
NC_015733:2720183:272333027233302724307978Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator6e-1168.6
NC_009256:1282793:130779313077931308749957Burkholderia vietnamiensis G4 chromosome 1, complete sequenceLysR family transcriptional regulator1e-0757.4
NC_012660:5242392:525720452572045257449246Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0757
NC_015565:348941:350352350352351260909Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeLysR family transcriptional regulator2e-0756.2
NC_013730:5914142:593181359318135932709897Spirosoma linguale DSM 74, complete genometranscriptional regulator, LysR family3e-0756.2
NC_010067:1414000:141918614191861420058873Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0755.5
NC_011126:1241655:126042712604271261350924Hydrogenobaculum sp. Y04AAS1, complete genometranscriptional regulator, LysR family5e-0755.1
NC_015733:1398083:142031714203171421243927Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator6e-0755.1
NC_016932:1309644:132219213221921323133942Corynebacterium pseudotuberculosis 316 chromosome, complete genometranscriptional activator protein lysR9e-0754.7
NC_017301:1328500:133718613371861338127942Corynebacterium pseudotuberculosis C231 chromosome, completeTranscriptional activator protein lysR1e-0654.3
NC_017303:1328777:133732713373271338268942Corynebacterium pseudotuberculosis I19 chromosome, complete genomeTranscriptional activator protein lysR1e-0654.3
NC_017305:1326351:133489713348971335838942Corynebacterium pseudotuberculosis PAT10 chromosome, completeTranscriptional activator protein lysR1e-0654.3
NC_020411:1232962:125176712517671252690924Hydrogenobaculum sp. HO, complete genometranscriptional regulator, LysR family9e-0754.3
NC_015587:1232642:125144212514421252365924Hydrogenobaculum sp. SHO chromosome, complete genometranscriptional regulator, LysR family9e-0754.3
NC_015557:1232772:125157212515721252495924Hydrogenobaculum sp. 3684 chromosome, complete genometranscriptional regulator, LysR family9e-0754.3
NC_017031:1328500:133730513373051338246942Corynebacterium pseudotuberculosis P54B96 chromosome, completeTranscriptional activator protein lysR1e-0654.3
NC_013592:1465015:148628514862851487232948Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family1e-0653.9
NC_014640:4951076:496593349659334966847915Achromobacter xylosoxidans A8 chromosome, complete genomeLysR family transcriptional regulator2e-0653.5
NC_015185:485866:506609506609507505897Desulfurobacterium thermolithotrophum DSM 11699 chromosome,transcriptional regulator, LysR family2e-0653.1
NC_012658:3923546:392475039247503925655906Clostridium botulinum Ba4 str. 657 chromosome, complete genomeLysR family transcriptional regulator3e-0652.8
NC_011772:5021404:503822250382225039115894Bacillus cereus G9842, complete genometranscriptional regulator, LysR family4e-0652.4
NC_011144:2674242:269478826947882695705918Phenylobacterium zucineum HLK1, complete genometranscriptional regulator, LysR family4e-0652.4
NC_010520:3938490:393969439396943940599906Clostridium botulinum A3 str. Loch Maree, complete genometranscriptional regulator, LysR family3e-0652.4
NC_013929:4927380:494002549400254940915891Streptomyces scabiei 87.22 chromosome, complete genomeLysR family transcriptional regulator7e-0651.6
NC_009792:1479779:149990114999011500767867Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-0651.6
NC_016641:5306000:531288153128815313837957Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator ycf308e-0651.2
NC_017200:4995075:501146350114635012356894Bacillus thuringiensis serovar finitimus YBT-020 chromosome,LysR family transcriptional regulator8e-0651.2