Pre_GI: BLASTP Hits

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Query: NC_007333:2093167:2115034 Thermobifida fusca YX, complete genome

Start: 2115034, End: 2116185, Length: 1152

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:1751179:1766287176628717674111125Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-71269
NC_013929:8106492:8116609811660981183031695Streptomyces scabiei 87.22 chromosome, complete genomemembrane-bound peptidase1e-68260
NC_003155:7979050:7984950798495079860801131Streptomyces avermitilis MA-4680, complete genomepeptidase7e-68258
NC_018750:1390029:1397180139718013984001221Streptomyces venezuelae ATCC 10712, complete genomeZn-dependent proteases3e-65249
NC_020389:1346358:1346358134635813474521095Methanosarcina mazei Tuc01, complete genomeZinc metalloprotease8e-23108
NC_003901:1568000:1570823157082315719171095Methanosarcina mazei Go1, complete genomehypothetical protein8e-23108
NC_008554:3055000:3069021306902130701721152Syntrophobacter fumaroxidans MPOB, complete genomepeptidase M509e-1994.7
NC_013501:931418:9517409517409528521113Rhodothermus marinus DSM 4252, complete genomepeptidase M502e-1687.4
NC_015966:2337833:2337833233783323389451113Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomepeptidase M503e-1686.7
NC_013665:2495234:2514537251453725156581122Methanocella paludicola SANAE, complete genomepeptidase M50 family protein6e-1685.5
NC_009380:3903392:3903392390339239045371146Salinispora tropica CNB-440 chromosome, complete genomepeptidase M509e-1684.7
NC_013174:1254874:1276700127670012778091110Jonesia denitrificans DSM 20603, complete genomepeptidase M503e-1479.7
NC_005042:513931:5139315139315151961266Prochlorococcus marinus subsp. marinus str. CCMP1375, completeMetal dependent membrane associated protease, S2P family2e-1170.5
NC_009633:2350892:236678423667842367701918Alkaliphilus metalliredigens QYMF chromosome, complete genomepeptidase M507e-1168.6
NC_014654:1113116:1113116111311611142521137Halanaerobium sp. 'sapolanicus' chromosome, complete genomeCBS domain containing protein2e-1067
NC_010516:3234791:324488332448833245734852Clostridium botulinum B1 str. Okra, complete genomeputative metalloprotease3e-0963.2
NC_012563:3416509:342336634233663424217852Clostridium botulinum A2 str. Kyoto, complete genomeputative metalloprotease4e-0962.8
NC_009698:3046833:305691430569143057765852Clostridium botulinum A str. Hall chromosome, complete genomemetalloprotease4e-0962.8
NC_009699:3217315:322740732274073228258852Clostridium botulinum F str. Langeland chromosome, complete genomemetalloprotease4e-0962.8
NC_016584:5388500:539978453997845400668885Desulfosporosinus orientis DSM 765 chromosome, complete genomeZn-dependent protease1e-0861.6
NC_014328:794000:810725810725811576852Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative stage IV sporulation protein FB5e-0755.8