Pre_GI: BLASTP Hits

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Query: NC_006905:4638707:4652038 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4652038, End: 4652868, Length: 831

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4716000:4728916472891647301751260Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-163574
NC_009792:3245368:3278160327816032793921233Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-120430
NC_013941:3300000:3326760332676033279921233Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-117422
NC_012917:1840172:1861399186139918627331335Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRelaxase/mobilization nuclease family protein8e-113406
NC_011283:4438500:4456389445638944576661278Klebsiella pneumoniae 342 chromosome, complete genomerelaxase/mobilization nuclease domain protein8e-113406
NC_010694:1052722:107422510742251075052828Erwinia tasmaniensis, complete genomehypothetical protein1e-97355
NC_010067:191190:2070122070122081691158Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-87323
NC_009436:3117661:3138136313813631393441209Enterobacter sp. 638, complete genomerelaxase/mobilization nuclease family protein3e-86318
NC_009792:3665369:3682562368256236837731212Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-86317
NC_009801:2898426:2924064292406429252781215Escherichia coli E24377A, complete genomerelaxase/mobilization nuclease domain protein6e-85313
NC_004547:1174650:1193409119340911947041296Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-85313
NC_011741:4570498:4587954458795445891621209Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-84313
CU928160:4570498:4587954458795445891621209Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-84313
NC_011094:2791719:2807975280797528092161242Salmonella enterica subsp. enterica serovar Schwarzengrund strrelaxase/mobilization nuclease domain-containing protein3e-83308
NC_016514:3573400:3592118359211835933591242Enterobacter cloacae EcWSU1 chromosome, complete genomerelaxase/Mobilization Nuclease family protein4e-83307
NC_016816:1545354:1568538156853815696291092Pantoea ananatis LMG 5342, complete genomerelaxase/mobilization nuclease domain protein7e-83306
NC_012880:3421500:3430823343082334319831161Dickeya dadantii Ech703, complete genomeRelaxase/mobilization nuclease family protein1e-82306
NC_014562:2563466:2582727258272725837641038Pantoea vagans C9-1 chromosome, complete genomehypothetical protein7e-76283
NC_008800:1090000:1106028110602811072991272Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,repetative plasmid-related protein6e-73274
NC_013971:73037:885268852689119594Erwinia amylovora ATCC 49946 chromosome, complete genomemobilization protein3e-57221
NC_012559:854507:8833798833798847041326Laribacter hongkongensis HLHK9, complete genomeRelaxase/mobilization nuclease topoisomerase/primase fusion protein9e-41167
NC_013222:229190:2398182398182408641047Robiginitalea biformata HTCC2501, complete genomehypothetical protein7e-35147
NC_011729:2732163:2751610275161027527881179Cyanothece sp. PCC 7424 chromosome, complete genomerelaxase2e-28125
NC_007973:3065632:308756730875673088193627Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein2e-22106
NC_010547:194500:2072282072282082921065Cyanothece sp. ATCC 51142 chromosome linear, complete sequencehypothetical protein3e-22105
NC_015571:2002489:202430020243002025226927Porphyromonas gingivalis TDC60, complete genomemobilization protein9e-1787.4
NC_019968:1304450:132760613276061328532927Prevotella dentalis DSM 3688 chromosome 2, complete sequencerelaxase/mobilization nuclease5e-1685.1
NC_019744:20500:3706737067384521386Cylindrospermum stagnale PCC 7417 plasmid pCYLST.02, completerelaxase/mobilization nuclease2e-1479.7
NC_009615:3904962:393117639311763932096921Parabacteroides distasonis ATCC 8503 chromosome, complete genomemobilization protein BmgA3e-1479.3
NC_009615:2590207:261980826198082620728921Parabacteroides distasonis ATCC 8503 chromosome, complete genomemobilization protein BmgA8e-1477.8
NC_004663:1409462:141524214152421416192951Bacteroides thetaiotaomicron VPI-5482, complete genomemobilization protein BmgA7e-1374.7
NC_009614:4528418:454814545481454549086942Bacteroides vulgatus ATCC 8482 chromosome, complete genomemobilization protein MocA/BmgA3e-1169.3
NC_010729:1014957:102941310294131030354942Porphyromonas gingivalis ATCC 33277, complete genomeputative mobilization protein5e-1168.6
NC_016610:726128:742472742472743413942Tannerella forsythia ATCC 43037 chromosome, complete genomerelaxase/mobilization nuclease domain-containing protein7e-1167.8
NC_015164:2473496:249453924945392495468930Bacteroides salanitronis DSM 18170 chromosome, complete genomeRelaxase/mobilization nuclease family protein1e-1067
NC_014033:1301154:131058413105841311468885Prevotella ruminicola 23 chromosome, complete genomemobilization protein2e-1066.2
NC_015164:2859000:288532128853212886241921Bacteroides salanitronis DSM 18170 chromosome, complete genomeRelaxase/mobilization nuclease family protein1e-0963.9
NC_016776:1609476:1628006162800616292741269Bacteroides fragilis 638R, complete genomeputative mobilisation protein3e-0962.4
NC_006347:1585191:1605466160546616067341269Bacteroides fragilis YCH46, complete genomehypothetical protein4e-0962
NC_003240:137907:1453411453411467561416Nostoc sp. PCC 7120 plasmid pCC7120beta, complete sequencehypothetical protein1e-0860.5
NC_015571:1030527:1052438105243810536671230Porphyromonas gingivalis TDC60, complete genomemobilization protein2e-0859.7
NC_016776:246648:2486782486782499071230Bacteroides fragilis 638R, complete genomeputative mobilisation protein8e-0857.8
NC_004663:2859158:2879397287939728806231227Bacteroides thetaiotaomicron VPI-5482, complete genomeputative mobilization protein1e-0757.4
NC_016111:3026000:3041114304111430428501737Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-0757
NC_016776:5174606:5200698520069852019931296Bacteroides fragilis 638R, complete genomehypothetical protein2e-0756.6
NC_003228:2010643:2048637204863720499321296Bacteroides fragilis NCTC 9343, complete genomehypothetical protein2e-0756.2
NC_015164:2961906:2964751296475129659981248Bacteroides salanitronis DSM 18170 chromosome, complete genomeRelaxase/mobilization nuclease family protein1e-0654.3
NC_014371:889043:8911138911138923871275Prevotella melaninogenica ATCC 25845 chromosome chromosome II,relaxase/mobilization nuclease domain protein1e-0653.9
NC_015311:403281:430641430641431561921Prevotella denticola F0289 chromosome, complete genomerelaxase/mobilization nuclease domain-containing protein1e-0653.9
NC_019968:382991:3854913854913865551065Prevotella dentalis DSM 3688 chromosome 2, complete sequencerelaxase/mobilization nuclease1e-0653.9
NC_016610:1310275:1342199134219913434491251Tannerella forsythia ATCC 43037 chromosome, complete genomerelaxase/mobilization nuclease domain-containing protein2e-0653.1
NC_004459:349500:3598453598453613501506Vibrio vulnificus CMCP6 chromosome I, complete sequenceType IV secretory pathway, VirD2 component3e-0652.8
NC_006347:112500:1341991341991354461248Bacteroides fragilis YCH46, complete genomehypothetical protein3e-0652.4
NC_016613:2103792:2118759211875921202641506Vibrio sp. EJY3 chromosome 1, complete sequencetype IV secretory pathway, VirD2 component5e-0652
NC_015571:2044000:2069579206957920708591281Porphyromonas gingivalis TDC60, complete genomehypothetical protein5e-0652