Pre_GI: BLASTP Hits

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Query: NC_006905:4638707:4646619 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4646619, End: 4647488, Length: 870

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4716000:472389247238924724803912Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-162569
NC_010067:191190:198452198452199297846Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-86319
NC_009792:3665369:369124536912453692090846Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-85314
NC_011283:4438500:445377944537794454645867Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein5e-79294
NC_002655:3538656:356633635663363567187852Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-79294
NC_002695:3468873:349904634990463499897852Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-79294
NC_011353:3573641:360328236032823604133852Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein4e-79294
NC_013008:3525428:355800735580073558858852Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-79294
NC_013941:3300000:333677833367783337629852Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-79294
NC_008800:1090000:109752010975201098374855Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-75283
NC_009801:2898426:293212929321292932983855Escherichia coli E24377A, complete genomehypothetical protein7e-75280
NC_016514:3573400:360031736003173601171855Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein9e-74276
NC_009436:3117661:314648831464883147342855Enterobacter sp. 638, complete genomehypothetical protein2e-73275
NC_011094:2791719:281369328136932814544852Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-69260
NC_016816:1545354:155310715531071553958852Pantoea ananatis LMG 5342, complete genomehypothetical protein7e-67254
NC_013421:1819036:184796518479651848831867Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-63243
NC_012917:1840172:184911218491121849981870Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-62239
NC_011741:4570498:457955145795514580360810Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-22106
CU928160:4570498:457955145795514580360810Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-22106
NC_016831:947281:956178956178957053876Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-1891.7
NC_011294:2053991:208640120864012087276876Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-1891.7
NC_011274:2044000:207752920775292078404876Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-1891.7
NC_011149:1987291:201655220165522017397846Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein9e-1890.9
NC_011601:2139188:214765021476502148525876Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-1790.5
NC_011205:2180598:221341622134162214291876Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-1789.4
NC_013716:2139952:216309721630972163942846Citrobacter rodentium ICC168, complete genomehypothetical protein2e-1789.4
NC_004431:2185750:221572722157272216620894Escherichia coli CFT073, complete genomehypothetical protein1e-1687
NC_008253:1938975:196888519688851969721837Escherichia coli 536, complete genomehypothetical protein2e-1686.3
NC_004547:1873390:188881018888101889685876Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-1686.3
NC_011745:2209288:226570122657012266564864Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1377.4
NC_016832:948029:956748956748957611864Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1376.6
NC_004631:948054:956794956794957657864Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1376.6