Pre_GI: BLASTP Hits

Some Help

Query: NC_006905:1342474:1351955 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 1351955, End: 1352248, Length: 294

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003485:1061344:106346110634611064204744Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor5e-1269.7
NC_017167:1648913:168576016857601686524765Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor5e-1166.2
NC_011035:541560:560415560415561260846Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein6e-1166.2
NC_010320:1268355:127709412770941277885792Thermoanaerobacter sp. X514 chromosome, complete genomeprophage antirepressor7e-1165.9
NC_017511:522679:538774538774539100327Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein1e-1065.1
NC_002946:1020175:104444710444471045292846Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein1e-1065.1
NC_015164:3099097:312458831245883125337750Bacteroides salanitronis DSM 18170 chromosome, complete genomeprophage antirepressor7e-1062.8
NC_017167:2298962:236904623690462369672627Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor9e-1062.4
NC_017986:5509569:552276155227615523573813Pseudomonas putida ND6 chromosome, complete genomeBRO domain protein1e-0962
NC_008595:771753:791751791751792539789Mycobacterium avium 104, complete genomegp54 protein1e-0962
NC_012522:4299287:432161943216194322419801Rhodococcus opacus B4, complete genomehypothetical protein6e-0959.7
NC_016077:1944000:194682219468221947619798Acidaminococcus intestini RyC-MR95 chromosome, complete genomeprophage antirepressor8e-0959.3
NC_018704:176088:194458194458195210753Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein9e-0958.9
NC_007434:1712000:174098017409801741699720Burkholderia pseudomallei 1710b chromosome I, complete sequenceBRO family, N-terminal domain protein1e-0858.5
NC_010655:1606901:163592716359271636721795Akkermansia muciniphila ATCC BAA-835, complete genomeprophage antirepressor3e-0857
NC_011001:2085986:209670520967052097502798Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein4e-0856.6
NC_004129:4333302:434864343486434349527885Pseudomonas fluorescens Pf-5, complete genomeprobable phage protein5e-0856.6
NC_016799:167362:181688181688182506819Corynebacterium diphtheriae 31A chromosome, complete genomeputative anti-repressor protein5e-0856.6
NC_002939:1866651:187870118787011879006306Geobacter sulfurreducens PCA, complete genomeBRO family protein, truncation1e-0755.5
NC_013173:953633:978862978862979515654Desulfomicrobium baculatum DSM 4028, complete genomeprophage antirepressor3e-0753.9
NC_006087:2439252:245342124534212454203783Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprophage antirepressor protein4e-0753.5
NC_013174:2321000:232849123284912329225735Jonesia denitrificans DSM 20603, complete genomephage antirepressor protein6e-0753.1
NC_013315:1679000:167955516795551680328774Clostridium difficile CD196 chromosome, complete genomehypothetical protein6e-0752.8
NC_015052:1030708:104657610465761047355780Bifidobacterium longum subsp. infantis 157F, complete genomephage antirepressor7e-0752.8
NC_009012:2927793:293490029349002935646747Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein7e-0752.8
NC_016642:3286654:329768932976893298555867Pseudovibrio sp. FO-BEG1 chromosome, complete genomeprophage antirepressor7e-0752.8
NC_012969:1574330:158274215827421583101360Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeprophage antirepressor8e-0752.4
NC_017208:694500:707763707763708560798Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein1e-0652
NC_014393:4323368:434092443409244341685762Clostridium cellulovorans 743B chromosome, complete genomeprophage antirepressor1e-0651.6
NC_013008:1513000:151840615184061519284879Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantirepressor protein encoded by prophage CP-933N2e-0651.2
NC_011353:1513000:151811815181181518996879Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantirepressor protein2e-0651.2
NC_002695:1571389:157719015771901578068879Escherichia coli O157:H7 str. Sakai, complete genomeputative antirepressor protein2e-0651.2
NC_002655:1655944:166116416611641662042879Escherichia coli O157:H7 EDL933, complete genomeputative antirepressor protein encoded by prophage CP-933N2e-0651.2
NC_009937:4122652:413458341345834135323741Azorhizobium caulinodans ORS 571, complete genomeputative prophage antirepressor2e-0650.8
NC_017179:1683199:168852816885281689337810Clostridium difficile BI1, complete genomehypothetical protein2e-0650.8
NC_010002:3547958:355748635574863558298813Delftia acidovorans SPH-1, complete genomeprophage antirepressor3e-0650.8