Pre_GI: BLASTP Hits

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Query: NC_006576:1743500:1763532 Synechococcus elongatus PCC 6301, complete genome

Start: 1763532, End: 1764173, Length: 642

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010475:953618:961936961936962577642Synechococcus sp. PCC 7002, complete genometranscription antitermination factor NusB2e-44178
NC_013204:2955500:297178429717842972371588Eggerthella lenta DSM 2243, complete genomeNusB antitermination factor5e-1374.3
NC_017297:2054000:207200520720052072436432Clostridium botulinum F str. 230613 chromosome, complete genomeN utilization substance protein B4e-1271.6
NC_009699:2056500:207190720719072072338432Clostridium botulinum F str. Langeland chromosome, complete genometranscription antitermination protein NusB4e-1271.6
NC_010516:1999500:201488720148872015318432Clostridium botulinum B1 str. Okra, complete genomeN utilization substance protein B4e-1271.6
NC_014972:847099:851362851362851784423Desulfobulbus propionicus DSM 2032 chromosome, complete genomeNusB antitermination factor3e-1168.6
NC_013124:1784117:180047118004711800908438Acidimicrobium ferrooxidans DSM 10331, complete genomeNusB antitermination factor3e-1168.6
NC_010520:2061502:207968120796812080106426Clostridium botulinum A3 str. Loch Maree, complete genomeN utilization substance protein B6e-1167.4
NC_016048:2243108:224439022443902244842453Oscillibacter valericigenes Sjm18-20, complete genomeantitermination protein NusB3e-1065.5
NC_011060:459615:495793495793496308516Pelodictyon phaeoclathratiforme BU-1, complete genomeNusB antitermination factor1e-0963.2
NC_011661:1049767:106035510603551060789435Dictyoglomus turgidum DSM 6724, complete genomeNusB antitermination factor1e-0963.2
NC_015738:629297:648993648993649520528Eggerthella sp. YY7918, complete genometranscription termination factor3e-0962
NC_014652:1758787:176014817601481760552405Caldicellulosiruptor hydrothermalis 108 chromosome, completenusb antitermination factor8e-0960.5
NC_014330:609982:629102629102629626525Brachyspira pilosicoli 95/1000 chromosome, complete genometranscription antitermination protein NusB1e-0859.7
NC_018607:805966:816447816447816971525Brachyspira pilosicoli B2904 chromosome, complete genometranscription antitermination protein NusB1e-0859.7
NC_014219:2491021:249443924944392494843405Bacillus selenitireducens MLS10 chromosome, complete genomeNusB antitermination factor2e-0858.9
NC_015499:119200:130723130723131127405Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNusB antitermination factor3e-0858.5
NC_014638:1509637:151431515143151514986672Bifidobacterium bifidum PRL2010 chromosome, complete genomen utilization substance protein B NusB4e-0858.2
NC_013169:1290000:130395113039511304364414Kytococcus sedentarius DSM 20547, complete genomeNusB antitermination factor4e-0858.2
NC_011244:94756:117305117305117745441Borrelia recurrentis A1, complete genometranscription antitermination protein NusB5e-0857.8
NC_018604:2053585:207551220755122076036525Brachyspira pilosicoli WesB complete genometranscription antitermination protein NusB6e-0857.8
NC_013410:3358008:337860533786053379045441Fibrobacter succinogenes subsp. succinogenes S85 chromosome,NusB antitermination factor7e-0857.4
NC_020411:558153:563101563101563520420Hydrogenobaculum sp. HO, complete genomeNusB antitermination factor2e-0755.8
NC_015587:558180:563128563128563547420Hydrogenobaculum sp. SHO chromosome, complete genomeNusB antitermination factor2e-0755.8
NC_015557:558127:563075563075563494420Hydrogenobaculum sp. 3684 chromosome, complete genomeNusB antitermination factor2e-0755.8
NC_010830:475248:4891174891174902531137Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0755.1
NC_019940:203718:220653220653221168516Thioflavicoccus mobilis 8321 chromosome, complete genometranscription antitermination factor NusB6e-0754.3
NC_014532:3036109:304138330413833041883501Halomonas elongata DSM 2581, complete genometranscription antitermination protein NusB5e-0651.2