Pre_GI Gene

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Host: NC_010475 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010475:953618 Synechococcus sp. PCC 7002, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9536189550841467conserved hypothetical protein glyco-hydrolase domain family 57QuickGO ontologyBLASTP
955335955646312NADH dehydrogenase subunit EQuickGO ontologyBLASTP
955663956280618NADH dehydrogenase subunit GQuickGO ontologyBLASTP
956342956953612NADH-plastoquinone oxidoreductase I subunitQuickGO ontologyBLASTP
9570059581231119NADH dehydrogenase subunit AQuickGO ontologyBLASTP
958334959137804FHA-domain proteinQuickGO ontologyBLASTP
9591759599337596-phosphogluconolactonaseQuickGO ontologyBLASTP
960029960856828hypothetical protein
961114961878765Conserved hypothetical protein DUF502 familyQuickGO ontologyBLASTP
961936962577642transcription antitermination factor NusBQuickGO ontologyBLASTP
962596963216621DnaJ domain proteinQuickGO ontologyBLASTP
964243964821579hypothetical protein
964875965330456hypothetical protein
965342965959618hypothetical protein
966311966703393hypothetical protein
967453968172720two-component response regulatorQuickGO ontologyBLASTP
9683049693111008PhoH-like proteinQuickGO ontologyBLASTP
9693459710991755sensory box proteinresponse regulatorQuickGO ontologyBLASTP
9711229721831062Dihydrouridine synthase DusQuickGO ontologyBLASTP
9721809732051026UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferaseQuickGO ontologyBLASTP
973225973800576uncharacterized stress response proteinQuickGO ontologyBLASTP
973933974400468hypothetical protein
9745429761461605putative GTPaseQuickGO ontologyBLASTP