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Query: NC_010475:953618:961936 Synechococcus sp. PCC 7002, complete genome

Start: 961936, End: 962577, Length: 642

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:1743500:176353217635321764173642Synechococcus elongatus PCC 6301, complete genometranscription antitermination protein NusB2e-43175
NC_007510:973828:979842979842980279438Burkholderia sp. 383 chromosome 1, complete sequencetranscription antitermination protein NusB2e-0756.2
NC_008781:3056407:307431930743193074840522Polaromonas naphthalenivorans CJ2, complete genomeNusB antitermination factor2e-0755.8
NC_007651:1726472:173153017315301731967438Burkholderia thailandensis E264 chromosome I, complete sequencetranscription antitermination factor NusB2e-0755.8
NC_014532:3036109:304138330413833041883501Halomonas elongata DSM 2581, complete genometranscription antitermination protein NusB4e-0754.7
NC_020181:2714559:275404027540402754459420Enterobacter aerogenes EA1509E, complete genomeTranscription termination protein NusB6e-0754.3
NC_019940:203718:220653220653221168516Thioflavicoccus mobilis 8321 chromosome, complete genometranscription antitermination factor NusB6e-0754.3
NC_017259:480656:487019487019487450432Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,transcription antitermination protein NusB5e-0754.3
NC_015731:169989:170468170468170968501Nitrosomonas sp. Is79A3 chromosome, complete genomeNusB antitermination factor1e-0653.1
NC_012724:829830:852442852442852879438Burkholderia glumae BGR1 chromosome 1, complete genomeNusB antitermination factor2e-0652.8
NC_017297:2054000:207200520720052072436432Clostridium botulinum F str. 230613 chromosome, complete genomeN utilization substance protein B2e-0652.4
NC_009699:2056500:207190720719072072338432Clostridium botulinum F str. Langeland chromosome, complete genometranscription antitermination protein NusB2e-0652.4
NC_010516:1999500:201488720148872015318432Clostridium botulinum B1 str. Okra, complete genomeN utilization substance protein B2e-0652.4
NC_011661:1049767:106035510603551060789435Dictyoglomus turgidum DSM 6724, complete genomeNusB antitermination factor3e-0651.6