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Query: NC_010475:953618 Synechococcus sp. PCC 7002, complete genome

Start: 953618, End: 976146, Length: 22529

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_019748:42358*423586787025513Stanieria cyanosphaera PCC 7437, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008819:19976019976021972519966Prochlorococcus marinus str. NATL1A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008820:96842396842398966021238Prochlorococcus marinus str. MIT 9303, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005071:1064000*1064000108618222183Prochlorococcus marinus str. MIT 9313, complete genome3e-0661.9BLASTN svgBLASTP svg