Pre_GI: OUP Neighbours

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Query: NC_010475:953618 Synechococcus sp. PCC 7002, complete genome

D: 26.9759

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

Number of Neighbours: 22

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010474:19256Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence77.1201 %Subject ←→ Query24.3008
NC_000911:2511514*Synechocystis sp. PCC 6803, complete genome76.0999 %Subject ←→ Query24.8906
NC_000911:1957758*Synechocystis sp. PCC 6803, complete genome76.1795 %Subject ←→ Query25.8755
NC_010475:1563578*Synechococcus sp. PCC 7002, complete genome81.7279 %Subject ←→ Query25.9272
NC_010475:2537500*Synechococcus sp. PCC 7002, complete genome80.5576 %Subject ←→ Query26.1339
NC_000911:240863*Synechocystis sp. PCC 6803, complete genome76.008 %Subject ←→ Query27.365
NC_011884:1898702Cyanothece sp. PCC 7425, complete genome75.383 %Subject ←→ Query28.4472
NC_000911:2777447*Synechocystis sp. PCC 6803, complete genome75.6281 %Subject ←→ Query29.3265
NC_000911:3436529Synechocystis sp. PCC 6803, complete genome76.6146 %Subject ←→ Query29.5991
NC_011884:315839Cyanothece sp. PCC 7425, complete genome75.4626 %Subject ←→ Query30.0014
NC_000911:1284552*Synechocystis sp. PCC 6803, complete genome76.2316 %Subject ←→ Query30.0663
NC_010475:649177*Synechococcus sp. PCC 7002, complete genome81.7126 %Subject ←→ Query30.186
NC_011884:2921618Cyanothece sp. PCC 7425, complete genome75.1195 %Subject ←→ Query30.5083
NC_010475:2188827*Synechococcus sp. PCC 7002, complete genome79.5895 %Subject ←→ Query30.8666
NC_011884:1665888Cyanothece sp. PCC 7425, complete genome75.1072 %Subject ←→ Query31.164
NC_011884:1029328Cyanothece sp. PCC 7425, complete genome75.2819 %Subject ←→ Query31.5114
NC_010475:2896000*Synechococcus sp. PCC 7002, complete genome77.1385 %Subject ←→ Query32.4872
NC_015510:4674774*Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.2696 %Subject ←→ Query33.2182
NC_010475:1671823*Synechococcus sp. PCC 7002, complete genome80.2819 %Subject ←→ Query33.4205
NC_010475:420978*Synechococcus sp. PCC 7002, complete genome79.1023 %Subject ←→ Query35.6235
NC_010475:1582856Synechococcus sp. PCC 7002, complete genome76.4246 %Subject ←→ Query36.1749
NC_010475:1161000Synechococcus sp. PCC 7002, complete genome81.7218 %Subject Query38.0701