Pre_GI: BLASTP Hits

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Query: NC_006511:1063249:1080832 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1080832, End: 1081446, Length: 615

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1057259:107484210748421075456615Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-91332
NC_004631:1091303:109829910982991098913615Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-89328
NC_003198:1867456:188221918822191882833615Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-89328
NC_003197:1945858:196072219607221961336615Salmonella typhimurium LT2, complete genomeputative inner membrane protein4e-88323
NC_011083:1993672:200854620085462009160615Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein4e-88323
NC_016810:1903426:191829019182901918904615Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-88323
NC_016856:1957263:197212719721271972741615Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein4e-88323
NC_016857:1903426:191829019182901918904615Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein4e-88323
NC_016860:1943203:195806719580671958681615Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein4e-88323
NC_016863:1905454:192031819203181920932615Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein4e-88323
NC_006905:1961774:197726419772641977878615Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein3e-88323
NC_012125:1897611:191484819148481915462615Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-88323
NC_011274:1299475:131864013186401319254615Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-87322
NC_016831:1690811:170566217056621706276615Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-87322
NC_011080:1944226:196572319657231966343621Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein1e-87322
NC_011294:1220526:125445212544521255072621Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-87322
NC_011094:1923870:193759419375941938214621Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-87322
NC_011205:1391971:140639214063921407006615Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853inner membrane protein5e-87320
NC_016832:1090274:109727010972701097668399Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-57222
NC_017046:1902788:191786919178691918267399Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein6e-56216
NC_010102:1137247:115836911583691158767399Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-56216
NC_005956:1616804:163007916300791630660582Bartonella henselae str. Houston-1, complete genomehypothetical protein2e-40165
NC_010515:1618093:165010616501061650693588Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehypothetical protein3e-31134
NC_010512:866932:872989872989873576588Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein1e-29129