Pre_GI: BLASTP Hits

Some Help

Query: NC_005126:4333767:4373415 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4373415, End: 4373642, Length: 228

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014562:1883517:189358918935891893822234Pantoea vagans C9-1 chromosome, complete genomehypothetical protein2e-1684
NC_017265:4265659:426870742687074268931225Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-1373.2
NC_017168:1631052:164947516494751649699225Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-1373.2
NC_009381:222735:241137241137241361225Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-1373.2
NC_005810:4469156:448058144805814480805225Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-1373.2
NC_008149:4053363:406459540645954064819225Yersinia pestis Nepal516, complete genomehypothetical protein4e-1373.2
NC_004088:266543:277774277774277998225Yersinia pestis KIM, complete genomehypothetical protein4e-1373.2
NC_013592:4511478:452653845265384526759222Dickeya dadantii Ech586, complete genomeDomain of unknown function DUF1813 HSP20-like protein3e-0857.4
NC_013421:4714478:473476847347684735001234Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF1813 HSP20-like protein5e-0856.2
NC_014228:2883500:289921528992152899535321Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-0755.5
NC_014228:2883500:289206628920662892386321Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-0754.3
NC_012962:1068102:108993910899391090262324Photorhabdus asymbiotica, complete genomeputative endoribonuclease SymE25e-0753.1
NC_012962:1068102:109771210977121098035324Photorhabdus asymbiotica, complete genomeputative endoribonuclease SymE35e-0753.1
NC_012962:1068102:108243110824311082754324Photorhabdus asymbiotica, complete genomeputative endoribonuclease SymE8e-0752.4
NC_012962:1068102:110472011047201105043324Photorhabdus asymbiotica, complete genomeputative endoribonuclease SymE48e-0752.4
NC_013892:1272448:128445512844551284775321Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-0652
NC_012214:1267589:127208612720861272388303Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-0652
NC_015566:4662171:467658246765824676809228Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-0652
NC_013421:4714478:472112447211244721315192Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF1813 HSP20-like protein1e-0651.6