Pre_GI: BLASTP Hits

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Query: NC_005126:142500:143880 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 143880, End: 144713, Length: 834

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:3881221:389765638976563898490835Salmonella enterica subsp. enterica serovar Typhi str. CT18,8e-151532
NC_016902:4236680:423714542371454237978834Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-146519
CP002516:4236680:423714542371454237978834Escherichia coli KO11, complete genomehypothetical protein1e-146519
NC_015761:299386:323688323688324521834Salmonella bongori NCTC 12419, complete genomeprophage protein9e-145512
NC_011601:4856717:486895248689524869785834Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-140499
NC_014618:690056:724777724777725610834Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein5e-124443
NC_015224:4386599:440557344055734406433861Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-123442
NC_012917:3241196:326731932673193268152834Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-122438
NC_016514:506611:526583526583527515933Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-122438
NC_013961:441719:467493467493468326834Erwinia amylovora, complete genomehypothetical protein1e-120432
NC_013971:3296272:330297433029743303807834Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein1e-120432
NC_009436:522649:543427543427544260834Enterobacter sp. 638, complete genomehypothetical protein6e-118423
NC_009832:1946401:194640119464011947234834Serratia proteamaculans 568, complete genomehypothetical protein9e-107386
NC_012947:44512:483424834249187846Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-94345
NC_011083:4547825:456346945634694564338870Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-93340
NC_004431:4319152:434094043409404341782843Escherichia coli CFT073, complete genomehypothetical protein4e-92337
NC_011750:4390000:441412244141224414964843Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-91335
NC_008253:3161311:317591431759143176756843Escherichia coli 536, complete genomehypothetical protein3e-90331
AP010958:3669500:367350536735053674347843Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-88326
NC_013353:3669500:367350536735053674347843Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-88326
NC_007946:1119000:114154011415401142382843Escherichia coli UTI89, complete genomehypothetical protein1e-88326
NC_013364:3701895:375851637585163759358843Escherichia coli O111:H- str. 11128, complete genomehypothetical protein9e-89326
NC_017328:3088907:313798331379833138825843Shigella flexneri 2002017 chromosome, complete genomehypothetical protein9e-88323
NC_004337:3049118:309827830982783099120843Shigella flexneri 2a str. 301, complete genomehypothetical protein9e-88323
NC_004741:3041294:308910530891053089947843Shigella flexneri 2a str. 2457T, complete genomehypothetical protein9e-88323
NC_008253:334467:360025360025360849825Escherichia coli 536, complete genomehypothetical protein8e-83306
NC_015663:1869000:187050918705091871129621Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein6e-57221
NC_011745:3405520:342622934262293426798570Escherichia coli ED1a chromosome, complete genome2e-56219
NC_016863:3905875:391249539124953912845351Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-50199
NC_016860:3964000:397409539740953974442348Salmonella enterica subsp. enterica serovar Typhimurium strATP-binding protein2e-50199
NC_011000:1262324:130457513045751305381807Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein1e-41170
NC_007434:3973145:399854039985403999346807Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein4e-41168
NC_011000:2732330:277862627786262779432807Burkholderia cenocepacia J2315 chromosome 1, complete sequencecosnerved hypothetical protein5e-41167
NC_009076:3564500:360521936052193606025807Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein8e-41167
NC_007651:3064530:313762131376213138604984Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein7e-40164
NC_015381:1588742:160234716023471603153807Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-39163
NC_002695:4584177:458496245849624585303342Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-21103
NC_002655:4653160:465394546539454654286342Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933L1e-21103
NC_011353:4688000:468806646880664688407342Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-21103
NC_010102:4745949:474832947483294748829501Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1377.4
NC_016831:4517850:452384745238474524347501Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1377
NC_011205:4718239:472403647240364724536501Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532e-1376.6
NC_008609:1976403:203721520372152038015801Pelobacter propionicus DSM 2379, complete genomehypothetical protein3e-1168.9