Pre_GI: BLASTP Hits

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Query: NC_004631:2842453:2848827 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2848827, End: 2849582, Length: 756

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2829767:283612628361262836881756Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,AraC-family transcriptional regulator2e-148525
NC_003198:2856596:286297028629702863725756Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible AraC-family transcriptional regulator2e-148525
NC_011094:2913500:291816429181642918919756Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator1e-147522
NC_011147:2814664:282103828210382821793756Salmonella enterica subsp. enterica serovar Paratyphi A strAraC family transcriptional regulator1e-147521
NC_006511:2819128:282550228255022826257756Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible AraC-family transcriptional regulator1e-147521
NC_011274:2881306:288643128864312887186756Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AraC family transcriptional regulator4e-147520
NC_011083:2980356:298548129854812986236756Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator4e-147520
NC_003197:3005842:301096730109673011722756Salmonella typhimurium LT2, complete genometranscriptional regulator4e-147520
NC_010102:2967464:297394929739492974704756Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-147520
NC_006905:2960260:296449429644942965249756Salmonella enterica subsp. enterica serovar Choleraesuis strtranscriptional regulator4e-147520
NC_011294:2890500:289562628956262896381756Salmonella enterica subsp. enterica serovar Enteritidis strAraC family transcriptional regulator4e-147520
NC_012125:2938519:294487829448782945633756Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator4e-147520
NC_016810:3028421:303354330335433034298756Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator4e-147520
NC_016831:2867766:287289028728902873645756Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative AraC-family transcriptional regulator4e-147520
NC_016856:3026426:303120430312043031959756Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stranscriptional regulator4e-147520
NC_016857:3028421:303354330335433034298756Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74transcriptional regulator4e-147520
NC_016860:3029272:303439730343973035152756Salmonella enterica subsp. enterica serovar Typhimurium strputative AraC family transcriptional regulator4e-147520
NC_016863:2974333:297945729794572980212756Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1transcriptional regulator4e-147520
NC_011080:2982346:298747229874722988227756Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator1e-146518
NC_011205:3050235:305535930553593056114756Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator1e-146518
NC_011149:2912219:291948429194842920239756Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator3e-146517
NC_010067:84093:102786102786103541756Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-133475
NC_015761:2726000:273121427312142731969756Salmonella bongori NCTC 12419, complete genomeAraC family transcriptional regulator2e-132471
NC_017046:3027161:303228330322833032903621Salmonella enterica subsp. enterica serovar Typhimurium str. 798AraC family transcriptional regulator1e-118425
NC_015761:299386:346940346940347644705Salmonella bongori NCTC 12419, complete genomeAraC family regulatory protein3e-1685.5
NC_014618:4114004:414461041446104145470861Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein4e-1582
NC_003198:3042000:304219830421983042956759Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-1377.4