Pre_GI: BLASTP Hits

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Query: NC_004603:370320:372883 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 372883, End: 374631, Length: 1749

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016602:3122700:3155908315590831576861779Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein0784
NC_016445:2938887:2944789294478929465491761Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0781
NC_012668:83641:9794597945997051761Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein0781
NC_002505:514732:5206345206345223941761Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehemolysin, putative0781
NC_004459:349500:3941723941723959141743Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative hemolysin2e-177622
NC_005139:796546:7995977995978013391743Vibrio vulnificus YJ016 chromosome I, complete sequenceputative hemolysin2e-175615
NC_015638:877233:8901758901758919891815Lacinutrix sp. 5H-3-7-4 chromosome, complete genomephospholipid/glycerol acyltransferase1e-90334
NC_015177:2642368:2647324264732426490751752Pedobacter saltans DSM 12145 chromosome, complete genomephospholipid/glycerol acyltransferase2e-89330
NC_016845:5162481:5171624517162451733241701Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative acetyltransferase1e-55218
NC_009648:4359875:4368968436896843706681701Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative acetyltransferase3e-55216
NC_011283:105245:1118471118471135471701Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-52207
NC_013850:109500:1170431170431187431701Klebsiella variicola At-22 chromosome, complete genomephospholipid/glycerol acyltransferase8e-52205
NC_012731:5074000:5083528508352850848471320Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative acetyltransferase1e-50201
NC_009615:2902871:294277429427742943748975Parabacteroides distasonis ATCC 8503 chromosome, complete genomehemolysin A7e-25115
NC_011565:620801:6343086343086353301023Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,hemolysin A2e-24114
NC_014933:602312:612120612120613106987Bacteroides helcogenes P 36-108 chromosome, complete genomehemolysin A3e-24114
NC_015571:2273503:228908922890892289949861Porphyromonas gingivalis TDC60, complete genomehypothetical protein4e-1480.1
NC_002696:3759551:377979937797993780506708Caulobacter crescentus CB15, complete genomeacyltransferase family protein1e-1275.5
NC_012968:507988:522603522603523373771Methylotenera mobilis JLW8, complete genomeornithine-acyl(acyl carrier protein) N-acyltransferase1e-0861.6
NC_009615:2902871:294195229419522942761810Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein5e-0860.1
NC_010084:2171881:219265321926532193459807Burkholderia multivorans ATCC 17616 chromosome 1, completeputative hemolysin-like protein1e-0758.5
NC_009256:1365500:137624213762421377048807Burkholderia vietnamiensis G4 chromosome 1, complete sequenceornithine-acyl[acyl carrier protein] N-acyltransferase2e-0757.8
NC_012791:2423466:246341824634182464278861Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein2e-0757.8
NC_007434:1809946:182603718260371826942906Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein5e-0756.6
NC_007651:3064530:3169373316937331703891017Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-0655.5