Pre_GI: BLASTP Hits

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Query: NC_004578:6089958:6119030 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6119030, End: 6119320, Length: 291

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:176885:186360186360186650291Pseudomonas syringae pv. phaseolicola 1448A, complete genomeaddiction module toxin RelE7e-35145
AC_000091:1627049:164706016470601647347288Escherichia coli W3110 DNA, complete genometoxin of the RelE-RelB toxin-antitoxin system5e-25113
NC_010473:1712984:173299517329951733282288Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; toxin of the RelE-RelB toxin-antitoxin system5e-25113
NC_010468:2265423:227717122771712277458288Escherichia coli ATCC 8739, complete genomeaddiction module toxin, RelE/StbE family5e-25113
CP002185:1770815:178534117853411785628288Escherichia coli W, complete genomeQin prophage; toxin of the RelE-RelB toxin-antitoxin system5e-25113
NC_000913:1625500:164337016433701643657288Escherichia coli K12, complete genomeQin prophage; toxin of the RelE-RelB toxin-antitoxin system5e-25113
CP002516:2305659:232022823202282320515288Escherichia coli KO11, complete genomeaddiction module toxin, RelE/StbE family5e-25113
NC_011092:9974:150451504515332288Salmonella enterica subsp. enterica serovar Schwarzengrund strtoxin RelE5e-25113
NC_012759:1517500:153542915354291535716288Escherichia coli BW2952 chromosome, complete genomeQin prophage; toxin of the RelE-RelB toxin-antitoxin system5e-25113
NC_013361:2138716:215442021544202154707288Escherichia coli O26:H11 str. 11368 chromosome, complete genometoxin of the RelE-RelB toxin-antitoxin system5e-25113
NC_016902:2305659:232022823202282320515288Escherichia coli KO11FL chromosome, complete genomeRelE/StbE family addiction module toxin5e-25113
CU928160:1668842:168336916833691683656288Escherichia coli IAI1 chromosome, complete genometoxin of the RelE-RelB toxin-antitoxin system; Qin prophage3e-24110
NC_011741:1668842:168336916833691683656288Escherichia coli IAI1 chromosome, complete genometoxin of the RelE-RelB toxin-antitoxin system; Qin prophage3e-24110
NC_009708:2537557:254094425409442541228285Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeaddiction module antitoxin8e-24108
NC_009999:38832:576105761057894285Shewanella baltica OS195 plasmid pS19502, complete sequenceaddiction module toxin, RelE/StbE family1e-21101
NC_012917:833721:833721833721834005285Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeaddiction module toxin, RelE/StbE family7e-2199.4
NC_016628:1:514051405430291Vibrio furnissii NCTC 11218 chromosome 2, complete sequencerelE protein2e-1684.7
NC_020908:4093560:410789841078984108188291Octadecabacter arcticus 238, complete genomeRelE-like addiction module toxin3e-1684
NC_012691:3126500:312857131285713128861291Tolumonas auensis DSM 9187, complete genomeaddiction module toxin, RelE/StbE family4e-1683.6
NC_011094:1584038:159385315938531594137285Salmonella enterica subsp. enterica serovar Schwarzengrund strstability protein StbE7e-1682.4
NC_011149:1578451:158858615885861588870285Salmonella enterica subsp. enterica serovar Agona str. SL483,putative stability protein StbE1e-1582
NC_003197:1611302:162656516265651626849285Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-1582
NC_016810:1576636:158341815834181583702285Salmonella enterica subsp. enterica serovar Typhimurium strplasmid stability protein1e-1582
NC_016856:1621279:163654216365421636826285Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-1582
NC_016857:1576636:158341815834181583702285Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-1582
NC_016860:1614280:162425516242551624539285Salmonella enterica subsp. enterica serovar Typhimurium strputative stability protein StbE1e-1582
NC_016863:1575488:158473315847331585017285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-1582
NC_017046:1574057:158330215833021583586285Salmonella enterica subsp. enterica serovar Typhimurium str. 798plasmid stability protein1e-1582
NC_002506:370629:399296399296399586291Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completerelE protein7e-1579.3
NC_009456:787322:853070853070853360291Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein7e-1579.3
NC_012580:353273:374988374988375278291Vibrio cholerae M66-2 chromosome II, complete sequencerelE protein7e-1579.3
NC_012583:361241:410582410582410872291Vibrio cholerae O395 chromosome chromosome II, complete sequencerelE protein7e-1579.3
NC_012667:931390:986662986662986952291Vibrio cholerae MJ-1236 chromosome 2, complete genomeRelE protein7e-1579.3
NC_016446:49618:9983599835100125291Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeRelE protein7e-1579.3
NC_016945:370471:399115399115399405291Vibrio cholerae IEC224 chromosome II, complete sequenceRelE protein7e-1579.3
NC_012962:3568046:360417536041753604462288Photorhabdus asymbiotica, complete genomehypothetical protein8e-1579
NC_014836:1052214:106539410653941065693300Desulfurispirillum indicum S5 chromosome, complete genomeRelE/StbE family addiction module toxin1e-1478.6
NC_008800:575141:582912582912583202291Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-1375.1
NC_020304:968936:977786977786978070285Desulfocapsa sulfexigens DSM 10523, complete genomeaddiction module toxin, RelE/StbE family1e-1375.1
NC_015942:2213710:222980022298002230081282Acidithiobacillus ferrivorans SS3 chromosome, complete genomeRelE/StbE family addiction module toxin3e-1373.6
NC_018645:2390032:240177524017752402065291Desulfobacula toluolica Tol2, complete genomeaddcition module toxin RelE/Stb6e-1372.8
NC_002506:370629:420238420238420528291Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein1e-1168.6
NC_009456:787322:834163834163834453291Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-1168.6
NC_012583:361241:429489429489429779291Vibrio cholerae O395 chromosome chromosome II, complete sequenceCytotoxic translational repressor of toxin-antitoxin stability system1e-1168.6
NC_012667:931390:965719965719966009291Vibrio cholerae MJ-1236 chromosome 2, complete genomestability protein StbE1e-1168.6
NC_016446:119914:120779120779121069291Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completestability protein StbE1e-1168.6
NC_016945:370471:420060420060420347288Vibrio cholerae IEC224 chromosome II, complete sequencestability protein StbE1e-1168.6
NC_011365:1171536:120425712042571204601345Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRelE/StbE family addiction module toxin4e-1167
NC_010125:1051735:107370510737051074049345Gluconacetobacter diazotrophicus PAl 5, complete genomeputative relE protein (antitoxin)4e-1166.6
NC_009425:63709:908589085890965108Enterobacter sp. 638 plasmid pENTE01, complete sequencehypothetical protein1e-0755.5
NC_009997:2352948:238206423820642382177114Shewanella baltica OS195, complete genomeaddiction module toxin, RelE/StbE family3e-0753.9