Pre_GI: BLASTP Hits

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Query: NC_004578:20738:41852 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 41852, End: 42757, Length: 906

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:4768500:479624847962484797156909Pseudomonas poae RE*1-1-14, complete genomeParB family protein5e-152536
NC_005773:106000:112706112706113614909Pseudomonas syringae pv. phaseolicola 1448A, complete genomeParB family protein1e-147522
NC_007794:561623:570248570248571147900Novosphingobium aromaticivorans DSM 12444, complete genomeRepB plasmid partition7e-85313
NC_004463:925140:947412947412948326915Bradyrhizobium japonicum USDA 110, complete genomepartitioning protein7e-74277
NC_008358:2638245:267480326748032675714912Hyphomonas neptunium ATCC 15444, complete genomeParB family protein3e-71268
NC_007494:1:113081130812216909Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceParB-like nuclease8e-69260
NC_009050:567209:587081587081587989909Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceRepB plasmid partition7e-68257
NC_019973:6102442:611605961160596116952894Mesorhizobium australicum WSM2073, complete genomeputative transcriptional regulator6e-65247
NC_003306:22228:413944139442281888Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencepartitioning protein5e-60231
NC_003064:22535:417014170142588888Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein5e-60231
NC_008825:1258500:128814412881441289043900Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-58226
NC_008826:170609:170609170609171508900Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein2e-58226
NC_008825:3161146:317093431709343171833900Methylibium petroleiphilum PM1, complete genomeputative ParB-like partioning protein4e-56218
NC_010725:3315007:333987333398733340397525Methylobacterium populi BJ001, complete genome2e-55216
NC_012660:5793200:582339658233965824304909Pseudomonas fluorescens SBW25 chromosome, complete genomeputative ParB-like protein3e-52205
NC_016514:3573400:358364235836423584538897Enterobacter cloacae EcWSU1 chromosome, complete genomeparB family protein2e-50199
NC_009801:2898426:290951329095132910409897Escherichia coli E24377A, complete genomeParB family protein2e-50199
NC_012947:1106000:111342611134261114322897Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeParB domain protein nuclease2e-50199
NC_012967:2669182:268047526804752681371897Escherichia coli B str. REL606 chromosome, complete genomeParB family protein2e-50199
NC_010814:1441327:144464914446491445515867Geobacter lovleyi SZ, complete genomeparB-like partition protein7e-50197
NC_009708:915814:927592927592928482891Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeParB family protein2e-49196
NC_009436:3117661:312865431286543129550897Enterobacter sp. 638, complete genomenuclease4e-49195
NC_011992:3375929:339069333906933391604912Acidovorax ebreus TPSY, complete genomeparB-like partition protein6e-49194
NC_015381:1:703270327946915Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative ParB-like protein1e-45184
NC_014562:2563466:257343525734352574307873Pantoea vagans C9-1 chromosome, complete genomepartitioning protein9e-43174
NC_007651:72952:824928249283133642Burkholderia thailandensis E264 chromosome I, complete sequencestage 0 sporulation protein J, putative2e-42173
NC_011283:4438500:447210044721004472972873Klebsiella pneumoniae 342 chromosome, complete genomeParB family protein4e-41168
NC_014752:834616:871808871808872554747Neisseria lactamica ST-640, complete genomehypothetical protein1e-28126
NC_007651:3064530:315828331582833158693411Burkholderia thailandensis E264 chromosome I, complete sequencestage 0 sporulation protein J, putative1e-21103
NC_014392:2513529:252011025201102520952843Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeparB-like partition protein3e-0962.8
NC_018664:3073022:308804730880473088895849Clostridium acidurici 9a chromosome, complete genomeparB-like partition protein6e-0858.5
NC_016627:4871875:488980648898064890639834Clostridium clariflavum DSM 19732 chromosome, complete genomeParB-like partition protein6e-0858.5
NC_016113:994469:1012920101292010141101191Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein9e-0857.8
NC_010645:3720501:344834484353906Bordetella avium 197N, complete genomechromosome partitioning protein1e-0757.4
NC_002927:5327094:420042005117918Bordetella bronchiseptica RB50, complete genomeprobable chromosome partitioning protein ParB1e-0757.4
NC_014251:243700:244951244951245709759Streptococcus pneumoniae TCH8431/19A chromosome, complete genomeParB family partitioning protein2e-0756.6
NC_011898:4044500:406076140607614061606846Clostridium cellulolyticum H10, complete genomeparB-like partition protein2e-0756.6
NC_020134:2948000:296655529665552967397843Clostridium stercorarium subsp. stercorarium DSM 8532, completeparB-like partition protein2e-0756.6
NC_016776:5174606:5182449518244951841611713Bacteroides fragilis 638R, complete genomeputative ParB-family protein3e-0756.2
NC_015458:3077804:308268330826833083603921Pusillimonas sp. T7-7 chromosome, complete genomechromosome partitioning protein4e-0755.8
NC_014640:6971000:697292669729266973852927Achromobacter xylosoxidans A8 chromosome, complete genomeparB-like partition protein domain-containing protein4e-0755.8
NC_005241:380415:392322392322393308987Ralstonia eutropha H16 megaplasmid pHG1, complete sequencepartitioning protein6e-0755.1
NC_015510:1012195:101219510121951013127933Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeparB-like partition protein5e-0755.1
NC_003228:2010643:2067285206728520689971713Bacteroides fragilis NCTC 9343, complete genomeputative ParB-family protein9e-0754.3
NC_014315:3319865:332048233204823321357876Nitrosococcus watsoni C-113 chromosome, complete genomeparB-like partition protein1e-0653.9
NC_014210:5752651:576188657618865762830945Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,parB-like partition protein1e-0653.9
NC_014220:2398334:239833423983342399176843Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeparB-like partition protein6e-0651.6
NC_007760:3735749:3739360373936037410571698Anaeromyxobacter dehalogenans 2CP-C, complete genomeparB-like partition protein7e-0651.6