Pre_GI: BLASTP Hits

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Query: NC_004463:5540924:5543986 Bradyrhizobium japonicum USDA 110, complete genome

Start: 5543986, End: 5545536, Length: 1551

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:1872537:1871026187102618725761551Bradyrhizobium japonicum USDA 110, complete genomeputative transposase01021
NC_003047:3360000:3395946339594633974601515Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE ISRM270723
NC_010087:376918:4234224234224249361515Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region0701
NC_010086:1816378:1849654184965418511681515Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region0701
NC_007951:1928906:1951349195134919528631515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase integrase, IstA0701
NC_007951:2087385:2106075210607521075891515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase0701
NC_007952:3238241:3239089323908932406031515Burkholderia xenovorans LB400 chromosome 2, complete sequenceIntegrase, catalytic region0701
NC_007951:769500:7943587943587958721515Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein0701
NC_007951:2206263:2220092222009222216061515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase, R6 like0701
NC_008686:405159:4312344312344327511518Paracoccus denitrificans PD1222 chromosome 1, complete sequenceIntegrase, catalytic region0698
NC_009467:117812:1334651334651349941530Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequenceintegrase catalytic subunit0696
NC_015186:2197236:2198803219880322003051503Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element0691
NC_010801:481601:4999224999225014061485Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu7a transposase0682
NC_010805:575709:6241366241366256201485Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu7b transposase0682
NC_016626:1669477:1669477166947716709581482Burkholderia sp. YI23 plasmid byi_1p, complete sequenceISBmu7a transposase0675
NC_017325:1897500:1911800191180019133081509Sinorhizobium meliloti SM11 chromosome, complete genometransposase9e-176617
NC_015590:145353:1473581473581488661509Sinorhizobium meliloti AK83 chromosome 1, complete sequenceintegrase catalytic subunit1e-175616
NC_016626:1781956:1785372178537217868711500Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase, IS21 family2e-139496
NC_007925:1085500:1100823110082311023161494Rhodopseudomonas palustris BisB18, complete genomeIntegrase, catalytic region5e-136484
NC_007951:1971584:1985835198583519873281494Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase integrase protein1e-135483
NC_007951:4741620:4756244475624447577371494Burkholderia xenovorans LB400 chromosome 1, complete sequenceputative transposase with integrase domain1e-135483
NC_007951:2904644:2940441294044129419341494Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase2e-132472
NC_006513:148950:1583071583071598031497Azoarcus sp. EbN1, complete genometransposase1e-129464
NC_012791:2832001:2846754284675428482471494Variovorax paradoxus S110 chromosome 1, complete genometransposase2e-128459
NC_016590:1183470:1188216118821611897151500Burkholderia sp. YI23 chromosome 3, complete sequenceintegrase catalytic subunit2e-128459
NC_016585:1004000:1024581102458110260561476Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceTransposase of ISAli13, IS21 family, ORFA8e-127454
NC_002678:4859111:487688148768814877831951Mesorhizobium loti MAFF303099, complete genometransposase4e-126452
NC_011206:2019577:2031455203145520329391485Acidithiobacillus ferrooxidans ATCC 53993, complete genomeIntegrase catalytic region1e-115417
NC_011884:1998559:2011735201173520132851551Cyanothece sp. PCC 7425, complete genome2e-109396
NC_011884:4366831:4385541438554143870911551Cyanothece sp. PCC 7425, complete genome2e-109396
NC_011884:2921618:2939048293904829405981551Cyanothece sp. PCC 7425, complete genome2e-109396
NC_011884:2194767:2208132220813222096821551Cyanothece sp. PCC 7425, complete genome2e-109396
NC_008750:1253354:1265548126554812670531506Shewanella sp. W3-18-1, complete genomeIntegrase, catalytic region2e-106386
NC_009931:117904:1359021359021376381737Acaryochloris marina MBIC11017 plasmid pREB6, complete sequencetransposase, putative3e-104379
NC_004431:3409389:3445858344585834473571500Escherichia coli CFT073, complete genomehypothetical protein2e-100366
NC_004431:1401681:1403622140362214051211500Escherichia coli CFT073, complete genomehypothetical protein2e-100366
NC_007941:11319:2851228512300111500Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein3e-99362
NC_009052:4168776:4168776416877641702781503Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-97355
NC_009052:4335754:4339397433939743408991503Shewanella baltica OS155, complete genomeIntegrase, catalytic region2e-96353
NC_009052:2107692:2119764211976421212661503Shewanella baltica OS155, complete genomeIntegrase, catalytic region2e-96353
NC_009052:3381943:3384965338496533864671503Shewanella baltica OS155, complete genomeIntegrase, catalytic region2e-96353
NC_009052:1211989:1226697122669712281991503Shewanella baltica OS155, complete genomeIntegrase, catalytic region2e-96353
NC_009052:4437649:4448857444885744503591503Shewanella baltica OS155, complete genomeIntegrase, catalytic region2e-96353
NC_009052:1899954:1916952191695219184541503Shewanella baltica OS155, complete genomeIntegrase, catalytic region2e-96353
NC_009052:3381943:3381943338194333834451503Shewanella baltica OS155, complete genomeIntegrase, catalytic region3e-96352
NC_008740:1484531:1504870150487015063361467Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region2e-92340
NC_014973:3290545:3305576330557633070631488Geobacter sp. M18 chromosome, complete genomeintegrase catalytic subunit7e-79295
NC_009483:66502:7784577845792931449Geobacter uraniireducens Rf4 chromosome, complete genomeintegrase catalytic subunit3e-77289
NC_002678:4859111:487782248778224878388567Mesorhizobium loti MAFF303099, complete genometransposase2e-73276
NC_004431:1166568:116711211671121167843732Escherichia coli CFT073, complete genome2e-54213
NC_017249:9198000:920239192023919202693303Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-22106
NC_008253:3122148:314004131400413140535495Escherichia coli 536, complete genomehypothetical protein7e-2099
NC_004431:1166568:116656811665681167122555Escherichia coli CFT073, complete genome5e-1996.3
NC_014158:233733:2355142355142372111698Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase1e-1481.6
NC_008541:472643:4841864841864859401755Arthrobacter sp. FB24 chromosome 1, complete sequenceTransposase and inactivated derivatives-like protein4e-1376.6
NC_013235:2257899:2291364229136422929681605Nakamurella multipartita DSM 44233, complete genomeIstA25e-1376.3
NC_013929:5850599:5857445585744558590911647Streptomyces scabiei 87.22 chromosome, complete genometransposase2e-1273.9
NC_008253:3122148:313966431396643139888225Escherichia coli 536, complete genomehypothetical protein3e-1273.9
NC_014006:2932959:294566929456692945893225Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein2e-1171.2
NC_008061:2106848:2129185212918521306901506Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region3e-1170.9
NC_008060:3155133:3193401319340131949061506Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceIntegrase, catalytic region3e-1170.9
NC_008543:127675:1390811390811405861506Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region3e-1170.9
NC_015383:229036:2298262298262310851260Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence5e-1169.7
NC_009615:2503465:2512746251274625143441599Parabacteroides distasonis ATCC 8503 chromosome, complete genometransposase7e-1169.3
NC_009615:322107:3407383407383423361599Parabacteroides distasonis ATCC 8503 chromosome, complete genometransposase7e-1169.3
NC_009615:4642500:4645290464529046468881599Parabacteroides distasonis ATCC 8503 chromosome, complete genometransposase7e-1169.3
NC_012724:359444:3851853851853866991515Burkholderia glumae BGR1 chromosome 1, complete genomeIntegrase, catalytic region7e-1169.3
NC_012724:3070386:3075628307562830771331506Burkholderia glumae BGR1 chromosome 1, complete genomeIntegrase, catalytic region6e-1169.3
NC_012721:2556160:2575408257540825769131506Burkholderia glumae BGR1 chromosome 2, complete genomeIntegrase, catalytic region6e-1169.3
NC_017167:1648913:1737316173731617387821467Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1transposase8e-1168.9
NC_006177:280234:3109973109973125111515Symbiobacterium thermophilum IAM 14863, complete genometransposase1e-1068.2
NC_009254:700891:7228347228347243391506Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit1e-1068.2
NC_012724:2547500:2575411257541125769281518Burkholderia glumae BGR1 chromosome 1, complete genomeIntegrase, catalytic region2e-1067.8
NC_009483:3331500:3335403333540333369231521Geobacter uraniireducens Rf4 chromosome, complete genomeintegrase catalytic subunit5e-1066.2
NC_006177:2883476:2890021289002128914781458Symbiobacterium thermophilum IAM 14863, complete genometransposase2e-0964.3
NC_005773:1333863:1338288133828813397781491Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy20, transposase IstA2e-0964.3
NC_009434:695582:7370807370807385521473Pseudomonas stutzeri A1501, complete genometransposase2e-0963.9
NC_006177:2398482:2461253246125324627581506Symbiobacterium thermophilum IAM 14863, complete genometransposase3e-0963.9
NC_009434:608765:6742836742836757551473Pseudomonas stutzeri A1501, complete genometransposase4e-0963.5
NC_009656:115390:1383671383671398751509Pseudomonas aeruginosa PA7 chromosome, complete genometransposase8e-0962.4
NC_011662:1160887:1167996116799611694861491Thauera sp. MZ1T, complete genomeIntegrase catalytic region9e-0962.4
NC_008782:3167440:3220651322065132221651515Acidovorax sp. JS42, complete genomeIntegrase, catalytic region1e-0861.6
NC_015565:2027279:2031858203185820333481491Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeintegrase catalytic subunit1e-0861.6
NC_017347:424500:4376084376084390351428Staphylococcus aureus subsp. aureus T0131 chromosome, completetransposase2e-0860.8
NC_017341:428500:4412704412704426971428Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative transposase2e-0860.8
NC_012918:4648220:4650002465000246515131512Geobacter sp. M21 chromosome, complete genomeintegrase3e-0860.8
NC_015572:4209000:4211811421181142133311521Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit4e-0860.1
NC_008782:752686:7781637781637796951533Acidovorax sp. JS42, complete genomeIntegrase, catalytic region6e-0859.7
NC_008782:1277117:1289444128944412909761533Acidovorax sp. JS42, complete genomeIntegrase, catalytic region6e-0859.7
NC_008782:3252092:3268020326802032695521533Acidovorax sp. JS42, complete genomeIntegrase, catalytic region6e-0859.7
NC_008782:867344:8724598724598739911533Acidovorax sp. JS42, complete genomeIntegrase, catalytic region6e-0859.7
NC_015740:141910:1505841505841520921509Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetransposase5e-0859.7
NC_010125:2483122:2511209251120925127981590Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase6e-0859.3
NC_011365:738321:7645157645157660381524Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeintegrase catalytic subunit7e-0859.3
NC_011365:1969198:1987862198786219893851524Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeintegrase catalytic subunit7e-0859.3
NC_015740:3486226:3501252350125235027601509Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetransposase9e-0858.9
NC_015222:983647:9839549839549859481995Nitrosomonas sp. AL212 chromosome, complete genomeIstB domain-containing protein ATP-binding protein1e-0758.5
NC_015520:2612767:2627649262764926291451497Mahella australiensis 50-1 BON chromosome, complete genomeSigma-70 region 4 type 22e-0758.2
NC_014638:56500:6925269252707121461Bifidobacterium bifidum PRL2010 chromosome, complete genomeIS21 family transposase2e-0758.2
NC_012108:4971086:4986740498674049882121473Desulfobacterium autotrophicum HRM2, complete genomeIstA32e-0758.2
NC_008346:2523289:2553593255359325550981506Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetransposase (25)1e-0758.2
NC_010511:1590500:1609409160940916106921284Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit2e-0757.8
NC_010511:1641416:1679034167903416803171284Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit2e-0757.8
NC_010511:2703684:2712854271285427141371284Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit2e-0757.8
NC_010511:4313769:4333333433333343346161284Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit2e-0757.8
NC_010511:5169338:5173572517357251748551284Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit2e-0757.8
NC_010511:6067000:6070796607079660720791284Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit2e-0757.8
NC_013446:2164974:2191577219157721931031527Comamonas testosteroni CNB-2, complete genomeIstA2e-0757.8
NC_013446:2237854:2242782224278222443081527Comamonas testosteroni CNB-2, complete genomeIstA2e-0757.4
NC_015740:3678342:3711523371152337130311509Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetransposase3e-0757.4
NC_014098:2809689:2824299282429928255401242Bacillus tusciae DSM 2912 chromosome, complete genomeIntegrase catalytic region3e-0757
NC_015222:1607757:1609077160907716113802304Nitrosomonas sp. AL212 chromosome, complete genomeIstB domain-containing protein ATP-binding protein4e-0757
NC_011365:738321:7383217383217397871467Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeintegrase catalytic subunit6e-0756.2
NC_013740:1943740:1960419196041919618491431Acidaminococcus fermentans DSM 20731, complete genomeIntegrase catalytic region6e-0756.2
NC_013223:1349000:1379623137962313811221500Desulfohalobium retbaense DSM 5692, complete genomeIstA28e-0755.8
NC_013223:1188500:1193896119389611953951500Desulfohalobium retbaense DSM 5692, complete genomeIstA28e-0755.8
NC_015733:3736104:3812470381247038139781509Pseudomonas putida S16 chromosome, complete genomeISPsy20, transposase IstA2e-0654.7
NC_012797:1:205132051321298786Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequenceputative transposase2e-0654.3
NC_015733:2581324:2581324258132425828321509Pseudomonas putida S16 chromosome, complete genomeISPsy20, transposase IstA3e-0653.9