Pre_GI: BLASTP Hits

Some Help

Query: NC_004463:2262467:2264468 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2264468, End: 2265103, Length: 636

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:7993713:801564380156438016026384Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator6e-68256
NC_009937:412302:415716415716416384669Azorhizobium caulinodans ORS 571, complete genomeGntR family transcriptional regulator2e-47188
NC_008686:1383891:140152714015271402195669Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, GntR family2e-46185
NC_008148:2231045:227183422718342272532699Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family2e-2099.4
NC_014011:472650:487302487302487922621Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family2e-1789
NC_007953:314872:320623320623321315693Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, GntR family2e-1789
NC_020829:809457:813097813097813771675Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator2e-1685.9
NC_008543:323773:326602326602327249648Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, GntR family2e-1685.5
NC_002947:4931476:493700649370064937698693Pseudomonas putida KT2440, complete genometranscriptional regulator, GntR family2e-1582.8
NC_009512:1691930:170640617064061707209804Pseudomonas putida F1, complete genometranscriptional regulator, GntR family6e-1580.9
NC_017986:4374979:438945543894554390258804Pseudomonas putida ND6 chromosome, complete genomeGntR family transcriptional regulator6e-1580.9
NC_010501:4080937:408689040868904087633744Pseudomonas putida W619, complete genometranscriptional regulator, GntR family8e-1580.5
NC_002678:5060670:510937251093725110070699Mesorhizobium loti MAFF303099, complete genometranscription regulator1e-1479.7
NC_016906:4123000:412848441284844129173690Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator4e-1477.8
NC_016642:2440070:247139724713972472071675Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator1e-1376.3
NC_003047:3360000:337337633733763374068693Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN3e-1375.5
NC_010170:1324758:133437413343741335066693Bordetella petrii, complete genomeprobable transcriptional regulator9e-1373.6
NC_018691:2810949:281205628120562812796741Alcanivorax dieselolei B5 chromosome, complete genomeGntR family transcriptional regulator2e-1272
NC_016593:762216:786841786841787500660Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, GntR8e-1270.5
NC_020210:661236:668499668499669158660Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator7e-1270.5
NC_013850:3340882:335431333543133354966654Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, GntR family2e-1168.9
NC_008392:666000:681288681288681968681Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, GntR family4e-1167.8
NC_014206:2971304:298470229847022985352651Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator9e-1167
NC_010676:897801:899693899693900427735Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, GntR family1e-1066.6
NC_009667:1341000:136099613609961361676681Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceGntR family transcriptional regulator1e-1066.6
NC_013526:65495:890168901689705690Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometranscriptional regulator, GntR family1e-1066.2
NC_004193:2921103:293098429309842931643660Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator2e-1066.2
NC_010175:3712456:372623837262383726933696Chloroflexus aurantiacus J-10-fl, complete genomeGntR domain protein3e-1065.1
NC_013729:4835452:485750648575064858159654Kribbella flavida DSM 17836, complete genometranscriptional regulator, GntR family8e-1063.9
NC_011830:2177187:220439422043942205059666Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, GntR family8e-1063.9
NC_009664:4423829:451763545176354518357723Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, GntR family1e-0963.2
NC_009921:5609770:561622556162255616935711Frankia sp. EAN1pec, complete genometranscriptional regulator, GntR family4e-0961.6
NC_013524:392089:401901401901402647747Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genometranscriptional regulator, GntR family5e-0961.2
NC_014840:205723:261196261196261846651Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family7e-0960.8
NC_014394:93344:110272110272110943672Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, GntR family6e-0960.8
NC_013947:1696671:171062117106211711286666Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family7e-0960.5
NC_008391:1210451:123699212369921237723732Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, GntR family8e-0960.5
NC_020272:3396800:342166934216693422334666Bacillus amyloliquefaciens IT-45, complete genomeFatty acid metabolism regulator protein9e-0960.5
NC_013939:1625491:163746116374611638132672Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator1e-0860.1
NC_007952:1293024:129591312959131296710798Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, GntR family1e-0860.1
NC_014098:1258559:126150612615061262153648Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, GntR family1e-0859.7
NC_021150:2315362:231536223153622316084723Azotobacter vinelandii CA6, complete genometranscriptional regulator, GntR2e-0859.3
NC_012560:2315350:231535023153502316072723Azotobacter vinelandii DJ, complete genometranscriptional regulator, GntR2e-0859.3
NC_011961:891815:896992896992897783792Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencetranscriptional regulater GntR family protein3e-0858.9
NC_010407:3132683:314793331479333148604672Clavibacter michiganensis subsp. sepedonicus chromosome, completeGntR family transcriptional regulator4e-0858.2
NC_008148:1859888:190316519031651903911747Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family4e-0858.2
NC_007963:3553678:356654835665483567216669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family4e-0858.2
NC_014410:989698:989698989698990465768Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, GntR family3e-0858.2
NC_011004:4183993:422052942205294221239711Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, GntR family5e-0857.8
NC_011894:6485500:649703764970376497684648Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family5e-0857.8
UCMB5137:3660165:368860236886023689270669Bacillus atrophaeus UCMB-5137putative transcriptional regulator5e-0857.8
NC_019970:929666:929666929666930433768Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional regulator7e-0857.4
NC_009654:4624459:462698046269804627651672Marinomonas sp. MWYL1, complete genomeGntR family transcriptional regulator7e-0857.4
NC_010505:3376322:339823433982343399088855Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, GntR family1e-0756.6
NC_002578:1434396:144095614409561441609654Thermoplasma acidophilum DSM 1728, complete genomeNta operon transcriptional regulator related protein2e-0755.8
NC_015145:92397:992569925699936681Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometranscriptional regulator5e-0754.7
NC_008254:611437:6283116283116295011191Mesorhizobium sp. BNC1, complete genometranscriptional regulator, GntR family6e-0754.3
NC_008786:3045770:3061342306134230624811140Verminephrobacter eiseniae EF01-2, complete genomeGntR domain protein6e-0754.3
NC_015145:3657103:367579336757933676560768Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometranscriptional regulator7e-0753.9
NC_007974:785216:801188801188802060873Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family1e-0653.5
NC_009328:1867971:186797118679711868669699Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeregulatory protein1e-0653.1
NC_000913:1625500:162637616263761627062687Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator2e-0652.8
CU928160:1625535:164533116453311646017687Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-0652.8
NC_010473:1712984:171600117160011716687687Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator2e-0652.8
AC_000091:1627049:163006616300661630752687Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator2e-0652.8
NC_008563:1651270:167156316715631672249687Escherichia coli APEC O1, complete genomehypothetical protein2e-0652.8
CP002185:1727493:174728917472891747975687Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator2e-0652.8
NC_011415:1715644:173544017354401736126687Escherichia coli SE11 chromosome, complete genomeputative transcriptional repressor2e-0652.8
NC_011741:1625535:164533116453311646017687Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-0652.8
NC_009007:57804:634406344064171732Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequencetranscriptional regulator, GntR family2e-0652.8
NC_013739:2106662:212626421262642127019756Conexibacter woesei DSM 14684, complete genometranscriptional regulator, GntR family2e-0652.8
NC_012967:1593101:159611815961181596804687Escherichia coli B str. REL606 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-0652.8
NC_012947:2189533:220404922040492204735687Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeGntR family transcriptional regulator2e-0652.8
NC_012759:1517500:151843515184351519121687Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-0652.8
NC_004463:1369165:139094013909401391659720Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein2e-0652.4
NC_009440:1045882:105601610560161056675660Metallosphaera sedula DSM 5348 chromosome, complete genomeGntR family transcriptional regulator3e-0652
NC_020291:4033000:404904640490464049720675Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, GntR family3e-0652
NC_013037:6344532:634809263480926348730639Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, GntR family5e-0651.2
NC_009142:5647737:565529756552975655986690Saccharopolyspora erythraea NRRL 2338, complete genomepossible transcriptional regulator, GntR family9e-0650.4