Pre_GI: BLASTP Hits

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Query: NC_004129:5481629:5500047 Pseudomonas fluorescens Pf-5, complete genome

Start: 5500047, End: 5500514, Length: 468

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4465247:448299344829934483460468Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-76282
NC_018080:4465618:448575944857594486205447Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-62238
NC_008463:4566976:459768945976894598135447Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-62238
NC_002516:1031386:105340010534001053846447Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-62238
NC_011770:4763506:478454547845454784991447Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-62238
NC_007484:130896:153104153104153511408Nitrosococcus oceani ATCC 19707, complete genome4-hydroxybenzoyl-CoA thioesterase4e-28123
NC_014315:114151:137860137860138264405Nitrosococcus watsoni C-113 chromosome, complete genometol-pal system-associated acyl-CoA thioesterase1e-27122
NC_010102:2287934:231065623106562311060405Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-27121
NC_008781:3056407:307619630761963076651456Polaromonas naphthalenivorans CJ2, complete genomethioesterase superfamily protein6e-27119
NC_015726:2817352:283763728376372838041405Cupriavidus necator N-1 chromosome 1, complete sequencethioesterase1e-26119
NC_017223:3608749:360943236094323609860429Bordetella pertussis CS chromosome, complete genomehypothetical protein5e-26116
NC_002929:3568106:356924735692473569675429Bordetella pertussis Tohama I, complete genomehypothetical protein5e-26116
NC_018012:1935500:195554719555471956008462Thiocystis violascens DSM 198 chromosome, complete genometol-pal system-associated acyl-CoA thioesterase1e-25115
NC_007973:2888824:291230629123062912710405Ralstonia metallidurans CH34 chromosome 1, complete sequence4-hydroxybenzoyl-CoA thioesterase9e-26115
NC_011000:3493575:349608934960893496574486Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative thioesterase3e-25114
NC_010939:321492:342260342260342649390Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein9e-25112
NC_010278:315941:337446337446337835390Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein1e-24112
NC_008060:341851:357733357733358218486Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence4-hydroxybenzoyl-CoA thioesterase3e-24110
NC_009053:313779:332646332646333035390Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein1e-23108
NC_012856:737170:757254757254757658405Ralstonia pickettii 12D chromosome 1, complete genometol-pal system-associated acyl-CoA thioesterase3e-23107
NC_010682:701912:719418719418719822405Ralstonia pickettii 12J chromosome 1, complete sequencetol-pal system-associated acyl-CoA thioesterase3e-23107
NC_004757:230541:249019249019249429411Nitrosomonas europaea ATCC 19718, complete genome4-hydroxybenzoyl-CoA thioesterase family active site5e-23106
NC_014311:2733897:273744627374462737823378Ralstonia solanacearum PSI07 chromosome, complete genomeacyl-CoA thioesterase, associated to Tol-Pal complex2e-22104
NC_018643:482676:482264482264482686423Alpha proteobacterium HIMB5 chromosome, complete genomeacyl-CoA thioester hydrolase, YbgC/YbaW family2e-22104
NC_009567:904922:929996929996930406411Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein5e-22103
NC_014924:725380:748898748898749308411Pseudoxanthomonas suwonensis 11-1 chromosome, complete genometol-pal system-associated acyl-CoA thioesterase7e-22102
NC_014166:1809052:182668718266871827055369Arcobacter nitrofigilis DSM 7299 chromosome, complete genomethioesterase superfamily protein3e-1890.9
NC_016831:2209834:223185422318542232195342Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-1890.1
NC_008783:145305:160943160943161383441Bartonella bacilliformis KC583, complete genometol-pal system-associated acyl-CoA thioesterase6e-1476.3
NC_013440:5543667:554987355498735550271399Haliangium ochraceum DSM 14365, complete genomethioesterase superfamily protein8e-1476.3
NC_014256:636000:655333655333655734402Helicobacter pylori B8 chromosome, complete genomehypothetical protein3e-1373.9
NC_017249:8576294:8612359861235986144162058Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-1373.2
NC_014935:1511835:152334615233461523723378Nitratifractor saLSUginis DSM 16511 chromosome, complete genomethioesterase superfamily protein6e-1373.2
NC_019970:743497:750046750046750486441Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeacyl-CoA thioester hydrolase, YbgC/YbaW family7e-1372.8
NC_007759:1666967:166765916676591668075417Syntrophus aciditrophicus SB, complete genomethioesterase5e-1270.1
NC_015318:1151422:116373511637351164124390Hippea maritima DSM 10411 chromosome, complete genomethioesterase superfamily protein2e-1167.8
NC_017192:88940:100571100571100945375Arcobacter sp. L, complete genomeputative thioesterase2e-1064.7
NC_012796:3267569:326839532683953268829435Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1064.7
NC_017167:1648913:176365217636521764044393Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-14-hydroxybenzoyl-CoA thioesterase3e-1064.3
NC_020304:547036:551274551274551711438Desulfocapsa sulfexigens DSM 10523, complete genomeacyl-CoA thioester hydrolase, YbgC/YbaW family6e-1063.2
NC_011830:2940500:294837029483702948819450Desulfitobacterium hafniense DCB-2, complete genomethioesterase superfamily protein9e-1062.4
NC_012489:1874415:187596218759621876474513Gemmatimonas aurantiaca T-27, complete genomeputative hydrolase3e-0960.8
NC_008312:6932847:694844469484446948929486Trichodesmium erythraeum IMS101, complete genome4-hydroxybenzoyl-CoA thioesterase5e-0857
NC_008786:2850736:286375928637592864178420Verminephrobacter eiseniae EF01-2, complete genomethioesterase superfamily protein9e-0855.8
NC_003106:1027176:103228510322851032689405Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-0753.5
NC_012780:284336:297776297776298195420Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein7e-0753.1
NC_016024:1472421:149044014904401490883444Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein9e-0752.8
NC_005945:3359598:337422333742233374642420Bacillus anthracis str. Sterne, complete genome4-hydroxybenzoyl-CoA thioesterase, putative2e-0651.6
NC_015760:2009425:201475220147522015165414Streptococcus salivarius CCHSS3, complete genomeesterase6e-0649.7
NC_013922:2463299:246423224642322464642411Natrialba magadii ATCC 43099 chromosome, complete genomethioesterase superfamily protein8e-0649.3