Pre_GI: BLASTP Hits

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Query: NC_004088:2541033:2559662 Yersinia pestis KIM, complete genome

Start: 2559662, End: 2561320, Length: 1659

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2263347:2280620228062022822781659Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein01136
NC_014029:2335021:2353650235365023553081659Yersinia pestis Z176003 chromosome, complete genomehypothetical protein01136
NC_010465:2428620:2445854244585424475721719Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein01134
NC_009708:2392640:2409887240988724116051719Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein01133
NC_011149:1987291:2032506203250620342361731Salmonella enterica subsp. enterica serovar Agona str. SL483,putative periplasmic protein4e-151535
NC_016831:947281:9496409496409513701731Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-149530
NC_011294:2053991:2092084209208420938141731Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-149530
NC_011274:2044000:2083217208321720849471731Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-149529
NC_011205:2180598:2219097221909722208271731Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein9e-149527
NC_010102:997417:9974179974179991471731Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-148525
NC_008258:401786:4087054087054104351731Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-126451
NC_017328:385552:3924713924713942011731Shigella flexneri 2002017 chromosome, complete genomehypothetical protein3e-125449
NC_004337:367687:3746073746073763371731Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-125449
NC_004741:366822:3737413737413754711731Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-125449