Pre_GI: BLASTP Hits

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Query: NC_003888:1395319:1398463 Streptomyces coelicolor A3(2), complete genome

Start: 1398463, End: 1399239, Length: 777

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:2704350:272817327281732728931759Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein5e-1271.6
NC_012943:2707677:273150027315002732258759Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein5e-1271.6
NC_011884:1821862:182516518251651825836672Cyanothece sp. PCC 7425, complete genomeSNARE associated Golgi protein4e-1065.5
NC_017297:2796000:280701528070152807734720Clostridium botulinum F str. 230613 chromosome, complete genomeDedA family protein1e-0963.5
NC_015859:1631573:165419116541911654871681Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein2e-0962.8
NC_010516:2777205:279108927910892791808720Clostridium botulinum B1 str. Okra, complete genomeDedA family protein2e-0962.8
NC_003888:3817000:381774538177453818494750Streptomyces coelicolor A3(2), complete genomeintegral membrane protein5e-0961.6
NC_010520:2807429:282162728216272822346720Clostridium botulinum A3 str. Loch Maree, complete genomeDedA family protein3e-0858.9
NC_016782:1251796:125603712560371256768732Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein2e-0756.2
NC_002935:1237585:128238212823821283083702Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein2e-0756.2
NC_016783:1274000:128036612803661281067702Corynebacterium diphtheriae INCA 402 chromosome, complete genomehypothetical protein2e-0756.2
NC_016785:1233384:123765512376551238356702Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein2e-0756.2
NC_016786:1251765:125603612560361256737702Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein2e-0756.2
NC_016787:1240000:124548912454891246190702Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein2e-0756.2
NC_016788:1214026:125547812554781256179702Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein2e-0756.2
NC_016789:1295918:130018913001891300890702Corynebacterium diphtheriae PW8 chromosome, complete genomehypothetical protein2e-0756.2
NC_016790:1218596:122286712228671223568702Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein2e-0756.2
NC_016799:1268706:131152313115231312224702Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein2e-0756.2
NC_016800:1243000:128463912846391285340702Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein2e-0756.2
NC_016801:1255611:130113213011321301884753Corynebacterium diphtheriae C7 (beta) chromosome, complete genomehypothetical protein3e-0755.8
NC_010556:2773396:277921927792192779872654Exiguobacterium sibiricum 255-15, complete genomeSNARE associated Golgi protein9e-0754.3
NC_018665:2563375:256901525690152569668654Exiguobacterium antarcticum B7 chromosome, complete genomeSNARE associated Golgi family protein1e-0653.9
NC_019940:1670262:1670262167026216725172256Thioflavicoccus mobilis 8321 chromosome, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase1e-0653.9
NC_013946:2050871:207503020750302075737708Meiothermus ruber DSM 1279 chromosome, complete genomeSNARE associated Golgi protein-like protein3e-0652.4
NC_009464:180335:190897190897191577681Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein4e-0652