Pre_GI: BLASTP Hits

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Query: NC_003228:2437288:2442297 Bacteroides fragilis NCTC 9343, complete genome

Start: 2442297, End: 2443136, Length: 840

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006347:2375480:238632923863292387168840Bacteroides fragilis YCH46, complete genomeAraC-type transcription regulator9e-164575
NC_016776:2516149:252699725269972527836840Bacteroides fragilis 638R, complete genomeputative AraC-type transcriptional regulator2e-163574
NC_004663:1365429:137704613770461377882837Bacteroides thetaiotaomicron VPI-5482, complete genomeAraC-type transcription regulator5e-112404
NC_004663:2246756:224892422489242249814891Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator1e-55216
NC_014933:3856561:387760838776083878456849Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family1e-49197
NC_015164:1952500:195627119562711957128858Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AraC family1e-48193
NC_009615:919495:925663925663926541879Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator1e-34147
NC_016776:3973428:398739639873963988241846Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein6e-27121
NC_003228:3934770:394874239487423949587846Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein6e-27121
NC_014364:3633291:363889336388933639771879Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family1e-25116
NC_003228:3085793:308968830896883090575888Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family transcriptional regulator4e-25115
NC_004663:2437760:247120524712052472053849Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator9e-25114
NC_004663:3680974:369676236967623697673912Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator2e-24113
NC_013730:4502965:452139745213974522266870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family1e-20100
NC_014933:979063:983963983963984871909Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family2e-1995.9
NC_006347:854301:873322873322874197876Bacteroides fragilis YCH46, complete genomehypothetical protein6e-1994.7
NC_003228:793846:809965809965810840876Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein6e-1994.7
NC_016776:844641:860760860760861635876Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein6e-1994.7
NC_009614:3081190:309934830993483100256909Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein5e-1891.7
NC_006347:4031000:404498540449854045563579Bacteroides fragilis YCH46, complete genometranscriptional regulator3e-1685.9
NC_016609:1305570:130853413085341309397864Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-1376.3
NC_009441:4218434:423875042387504239445696Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein5e-1375.1
NC_014933:3791840:381156138115613812442882Bacteroides helcogenes P 36-108 chromosome, complete genomehelix-turn-helix- domain containing protein AraC type1e-1273.6
NC_015690:1818333:1872120187212018737301611Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYbbB4e-1272
NC_016935:2347691:2401895240189524035051611Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-1272
NC_009441:5248791:526511952651195265988870Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1170.5
NC_013132:6385223:640559164055916406514924Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family3e-1169.3
NC_014655:2366201:237290323729032373763861Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arac family4e-1168.9
NC_019897:3251639:3253455325345532550831629Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain5e-1168.6
NC_016609:2730449:273712227371222738024903Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator8e-1167.8
NC_020054:3132478:313830531383053139264960Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family7e-1167.8
NC_003228:2473956:247395624739562474882927Bacteroides fragilis NCTC 9343, complete genomeputative AraC family transcriptional regulator9e-1167.4
NC_019960:306254:333554333554334501948Prevotella dentalis DSM 3688 chromosome 1, complete sequenceDNA-binding domain-containing protein, AraC-type1e-1067
NC_009441:3522519:353988035398803540680801Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1066.6
NC_013730:2359939:235993923599392360808870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family2e-1066.6
NC_009901:3317068:332237033223703323242873Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family2e-1066.2
NC_013730:778076:782821782821783741921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-1065.9
NC_016609:2150863:219593621959362196844909Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator4e-1065.5
NC_013730:4573077:458463145846314585539909Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family8e-1064.7
NC_012880:1585255:160704616070461608035990Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family7e-1064.7
NC_002950:879930:883361883361884209849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family9e-1064.3
NC_002950:1511955:153145315314531532301849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family9e-1064.3
NC_013730:4399643:440355544035554404475921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family1e-0963.5
NC_016609:4233701:424485042448504245719870Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-0963.2
NC_014815:2055286:205897420589742059891918Micromonospora sp. L5 chromosome, complete genomehelix-turn-helix, arac domain protein3e-0962.8
NC_014391:1812500:181434718143471815264918Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein3e-0962.8
NC_016047:876875:8788388788388811232286Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeAraC family transcriptional regulator3e-0962.8
NC_013730:4502965:452028045202804521137858Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family2e-0962.8
NC_013730:4811911:482723048272304828150921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-0962.4
NC_013132:4355363:439114343911434392060918Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family4e-0962.4
NC_013132:153163:156153156153157094942Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family5e-0962
NC_015434:1885373:188757818875781888468891Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix, arac domain-containing protein6e-0961.6
NC_004547:1873390:188300518830051883862858Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator8e-0961.2
NC_012778:1778654:1778654177865417801981545Eubacterium eligens ATCC 27750, complete genometwo-component system, response regulator YesN8e-0961.2
NC_014479:736102:7361027361027383872286Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeAraC/XylS family transcriptional regulator7e-0961.2
NC_019968:1084288:110312511031251103973849Prevotella dentalis DSM 3688 chromosome 2, complete sequenceDNA-binding domain-containing protein, AraC-type1e-0860.8
NC_016114:7282882:730901673090167309861846Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator1e-0860.1
NC_013132:1652477:165247716524771653346870Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family2e-0860.1
NC_016609:606000:611143611143612063921Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-0860.1
NC_013730:4811911:482916548291654830043879Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-0859.3
NC_004129:926479:934135934135934989855Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family3e-0859.3
NC_020054:4161049:4187679418767941887041026Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family3e-0859.3
NC_017986:5605197:563115756311575632029873Pseudomonas putida ND6 chromosome, complete genomeHelix-turn-helix domain-containing protein3e-0859.3
NC_020134:2832857:2831257283125728328791623Clostridium stercorarium subsp. stercorarium DSM 8532, completeTwo component transcriptional regulator, AraC family4e-0858.9
NC_014624:3463272:3467956346795634692181263Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein5e-0858.5
NC_015376:1752883:177295817729581773878921Burkholderia gladioli BSR3 chromosome chromosome 2, completeAraC family transcriptional regulator6e-0858.5
NC_016609:4331359:434339043433904344277888Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator6e-0858.2
NC_016609:606000:606363606363607280918Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator7e-0858.2
NC_016609:606000:608282608282609205924Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator9e-0857.8
NC_016609:6022778:603476460347646035642879Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator9e-0857.8
NC_015703:4483500:451260045126004513517918Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator1e-0757.4
NC_009441:3562125:357912935791293579977849Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0757.4
NC_016609:4834378:487799848779984878891894Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator1e-0757
NC_016633:1130705:114672511467251147495771Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain2e-0757
NC_020244:783125:7831257831257854102286Bacillus subtilis XF-1, complete genomehypothetical protein2e-0757
NC_013406:1217385:1220860122086012224821623Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator2e-0756.6
NC_013037:1015210:103550010355001036360861Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family4e-0755.8
NC_010995:1648897:1664476166447616654831008Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, AraC family3e-0755.8
NC_016582:1639375:165691016569101657806897Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator3e-0755.8
NC_008261:1249595:1267397126739712689171521Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AraC family3e-0755.8
NC_010338:4148667:416203941620394162932894Caulobacter sp. K31, complete genometranscriptional regulator, AraC family4e-0755.5
NC_019896:3281193:3296019329601932983042286Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein5e-0755.5
NC_015947:1937341:195358619535861954440855Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator5e-0755.5
NC_000964:764118:7651757651757674602286Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein5e-0755.1
NC_014366:1663034:1664567166456716656041038Gamma proteobacterium HdN1, complete genometranscriptional regulator, AraC family5e-0755.1
NC_014976:2981777:2983740298374029860252286Bacillus subtilis BSn5 chromosome, complete genomeAraC/XylS family transcriptional regulator5e-0755.1
NC_015690:1772015:179601417960141796901888Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator6e-0754.7
NC_019842:3921424:394370939437093944290582Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,protein AdaA7e-0754.7
NC_016935:2302055:232616123261612327048888Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator7e-0754.7
NC_017195:742298:7433557433557456402286Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, AraC family protein7e-0754.7
NC_020410:3868573:389264338926433893224582Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completemethylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family)1e-0654.3
NC_013730:3863581:3873044387304438758662823Spirosoma linguale DSM 74, complete genometwo component transcriptional regulator, AraC family1e-0654.3
NC_014624:1840209:1866679186667918680071329Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator1e-0654.3
NC_013132:7204082:722428772242877225204918Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-0653.9
NC_013406:3521489:352296635229663523859894Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_009483:3644677:366996336699633670763801Geobacter uraniireducens Rf4 chromosome, complete genomeresponse regulator receiver protein2e-0653.5
NC_018645:4945698:4945698494569849467051008Desulfobacula toluolica Tol2, complete genomeAraC family transcriptional regulator2e-0653.5
NC_004547:1837500:184938418493841850334951Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator2e-0653.5
NC_016935:2069562:209206820920682092916849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0653.5
NC_015690:1542061:156474015647401565588849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator1e-0653.5
NC_009725:3878862:390094139009413901522582Bacillus amyloliquefaciens FZB42, complete genomeAdaA1e-0653.5
NC_019897:1577015:1595223159522315967851563Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain2e-0653.1
NC_014041:1395761:140434314043431404846504Zunongwangia profunda SM-A87 chromosome, complete genome4-hydroxyphenylacetate catabolism regulatory protein HpaA2e-0653.1
NC_013205:2332174:234776623477662348590825Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, AraC family3e-0652.8
NC_016935:2918689:292111229211122922005894Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_014720:154111:1778311778311802002370Caldicellulosiruptor kronotskyensis 2002 chromosome, completetranscriptional regulator, arac family2e-0652.8
NC_015846:2285017:2287061228706122899012841Capnocytophaga canimorsus Cc5 chromosome, complete genomeAutoinducer 2 sensor kinase/phosphatase luxQ4e-0652.4
CP002207:227118:2271182271182294422325Bacillus atrophaeus 1942, complete genometranscriptional regulator (AraC/XylS family) protein4e-0652.4
NC_014639:227118:2271182271182294422325Bacillus atrophaeus 1942 chromosome, complete genomeAraC/XylS family transcriptional regulator4e-0652.4
UCMB5137:303641:3046993046993070232325Bacillus atrophaeus UCMB-5137transcriptional regulator (AraC/XylS family) protein4e-0652.4
NC_015690:2369510:237275123727512373644894Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator3e-0652.4
NC_019897:1577015:1618360161836016198861527Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain3e-0652.4
NC_014632:1404000:141681214168121417717906Ilyobacter polytropus DSM 2926 chromosome, complete genomeAraC family transcriptional regulator4e-0652
NC_014008:669170:674515674515675411897Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, AraC family6e-0651.6
NC_014206:3391352:3391352339135233929441593Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator6e-0651.6
NC_010001:4730000:473538047353804736159780Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family5e-0651.6
NC_013406:3819577:384470238447023845550849Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator8e-0651.2
NC_010320:1949852:1967413196741319690051593Thermoanaerobacter sp. X514 chromosome, complete genomeresponse regulator receiver protein9e-0651.2
NC_014538:985339:9853399853399869311593Thermoanaerobacter sp. X513 chromosome, complete genomeAraC family two component transcriptional regulator9e-0651.2
NC_016641:2773757:2773757277375727753491593Paenibacillus terrae HPL-003 chromosome, complete genomeAraC family transcriptional regulator9e-0650.8
NC_015311:2626850:264619326461932647041849Prevotella denticola F0289 chromosome, complete genomeAraC family transcriptional regulator9e-0650.8
NC_016894:3935161:395103139510313951900870Acetobacterium woodii DSM 1030 chromosome, complete genomeAraC family transcriptional regulator1e-0550.8