Pre_GI: BLASTP Hits

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Query: NC_003210:870587:870587 Listeria monocytogenes EGD-e, complete genome

Start: 870587, End: 871807, Length: 1221

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain has numerous pathogenicity islands and genes as compared to the related non-pathogenic organism Listeria innocua. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013766:906550:9065509065509077701221Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein0701
NC_012668:3037345:3048365304836530496391275Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTetA7e-33141
NC_010410:3606826:3641859364185936431331275Acinetobacter baumannii AYE, complete genomeTetracycline resistance protein, class A (TETA(A))7e-33141
NC_012032:448161:4525394525394537501212Chloroflexus sp. Y-400-fl, complete genomemajor facilitator superfamily MFS_11e-32141
NC_005823:2840000:2861270286127028624991230Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130permease4e-32139
NC_011586:268927:2922162922162933431128Acinetobacter baumannii AB0057 chromosome, complete genometetracycline resistance protein, class A2e-30133
NC_015161:2060369:2064492206449220657331242Deinococcus proteolyticus MRP chromosome, complete genomemajor facilitator superfamily MFS_14e-30132
NC_009838:81913:8960389603907931191Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTetA2e-29130
NC_015277:380624:3984053984053996131209Sphingobacterium sp. 21 chromosome, complete genomemajor facilitator superfamily MFS_11e-27124
NC_013062:627000:6750276750276762621236Flavobacteriaceae bacterium 3519-10, complete genomeTetracycline efflux protein TetA1e-27124
NC_005042:1719055:1719055171905517203141260Prochlorococcus marinus subsp. marinus str. CCMP1375, completePermease of the major facilitator superfamily3e-27123
NC_003919:5056650:5075447507544750767121266Xanthomonas axonopodis pv. citri str. 306, complete genometetracycline-efflux transporter2e-25117
NC_020418:448687:4588664588664600711206Morganella morganii subsp. morganii KT, complete genomemajor facilitator superfamily protein2e-24114
NC_017387:247462:2876772876772888701194Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometetracycline resistance protein, class G (TETA(G))2e-24114
NC_017171:280762:2856542856542868891236Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)1e-24114
NC_003384:157158:1779351779351791401206Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtetracycline resistance protein3e-24113
NC_011083:4547825:4606940460694046081451206Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tetracycline resistance protein, class B3e-24113
NC_013365:92973:9669896698979031206Escherichia coli O111:H- str. 11128 plasmid pO111_1, completetetracycline resistance protein TetB3e-24113
NC_016860:4055117:4063086406308640642911206Salmonella enterica subsp. enterica serovar Typhimurium strtetracycline resistance protein3e-24113
NC_017328:1075535:1106058110605811072631206Shigella flexneri 2002017 chromosome, complete genomeTetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter)3e-24113
NC_017328:1075535:1119452111945211206571206Shigella flexneri 2002017 chromosome, complete genomeTetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter)3e-24113
CU928145:4950723:4974007497400749752601254Escherichia coli 55989 chromosome, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)3e-24113
NC_011748:4950723:4974007497400749752601254Escherichia coli 55989, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)3e-24113
NC_011749:34056:4355043550448031254Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetetracycline efflux transporter3e-24113
NC_009483:936000:9406069406069418441239Geobacter uraniireducens Rf4 chromosome, complete genomemajor facilitator transporter3e-23110
NC_010410:3606826:3671432367143236726071176Acinetobacter baumannii AYE, complete genomeTetracycline resistance protein, class G (TETA(G))6e-23108
NC_009349:3396:4109410953261218Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetetracycline resistance protein TetA(E)7e-22105
NC_010939:405477:4158074158074169461140Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTetracycline resistance protein, class G5e-22105
NC_005126:2222000:2225254222525422265191266Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-21103
NC_012962:3060063:3078973307897330802381266Photorhabdus asymbiotica, complete genomesimilar to tetracycline-efflux transporter8e-21101
NC_010519:1963256:1979596197959619807981203Haemophilus somnus 2336 chromosome, complete genomemajor facilitator transporter1e-20100
NC_005070:2374850:2395742239574223970401299Synechococcus sp. WH 8102, complete genomemultidrug efflux transporter, MFS family4e-2099.4
NC_009091:1598044:1613061161306116143291269Prochlorococcus marinus str. MIT 9301, complete genomemultidrug efflux transporter, MFS family3e-1996.7
NC_002932:937157:9410909410909423581269Chlorobium tepidum TLS, complete genomedrug resistance protein, putative2e-1584
NC_010175:448020:4523984523984536081211Chloroflexus aurantiacus J-10-fl, complete genome1e-1481.3
NC_007355:970670:9840039840039853521350Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceclass H tetracycline resistance efflux protein2e-1377.8
NC_018876:863314:8633148633148646391326Methanolobus psychrophilus R15 chromosome, complete genomedrug-efflux transporter2e-1274.3
NC_017195:2498113:2523659252365925248611203Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completemultidrug resistance protein 23e-1273.2
NC_014479:2505823:2524216252421625254181203Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeefflux transporter9e-1271.6
UCMB5137:1:2696926969281711203Bacillus atrophaeus UCMB-5137efflux transporter8e-1168.6
NC_014976:684000:7008387008387020401203Bacillus subtilis BSn5 chromosome, complete genomeefflux transporter8e-1168.6
NC_009481:2081500:2086183208618320873761194Synechococcus sp. WH 7803 chromosome, complete genomemajor facilitator superfamily permease4e-1066.2
NC_000964:2702376:2716199271619927174011203Bacillus subtilis subsp. subtilis str. 168, complete genomemultidrug-efflux transporter5e-1065.9
NC_019896:1483073:1508442150844215096441203Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeMultidrug resistance protein 28e-1065.1
NC_020244:2509000:2531624253162425328261203Bacillus subtilis XF-1, complete genomeefflux transporter1e-0964.3
NC_016047:2658000:2682573268257326837751203Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completemultidrug resistance protein 23e-0963.5
NC_016641:5671186:5699024569902457002201197Paenibacillus terrae HPL-003 chromosome, complete genomemajor facilitator superfamily protein1e-0861.6
NC_003197:1611302:1621409162140916226501242Salmonella typhimurium LT2, complete genomeputative multidrug efflux protein5e-0859.3
NC_016810:1576636:1578262157826215795031242Salmonella enterica subsp. enterica serovar Typhimurium strputative multidrug efflux protein5e-0859.3
NC_016856:1621279:1631386163138616326271242Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative multidrug efflux protein5e-0859.3
NC_016857:1576636:1578262157826215795031242Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative multidrug efflux protein5e-0859.3
NC_016860:1614280:1619099161909916203401242Salmonella enterica subsp. enterica serovar Typhimurium strputative multidrug efflux protein5e-0859.3
NC_016863:1575488:1579577157957715808181242Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative multidrug efflux protein5e-0859.3
NC_017046:1574057:1578146157814615793871242Salmonella enterica subsp. enterica serovar Typhimurium str. 798multidrug efflux protein5e-0859.3
NC_011094:1584038:1588857158885715900981242Salmonella enterica subsp. enterica serovar Schwarzengrund strmajor facilitator superfamily protein6e-0858.9
NC_011149:1578451:1592785159278515940261242Salmonella enterica subsp. enterica serovar Agona str. SL483,major facilitator superfamily MFS_11e-0758.5
NC_014041:3662906:3676002367600236772161215Zunongwangia profunda SM-A87 chromosome, complete genomemultidrug-efflux transporter9e-0858.5
NC_015761:1488807:1498916149891615001541239Salmonella bongori NCTC 12419, complete genomemultidrug efflux protein9e-0858.5
NC_003198:1463253:1472365147236514736061242Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative multidrug efflux protein8e-0858.5
NC_014761:1981435:1999855199985520010391185Oceanithermus profundus DSM 14977 chromosome, complete genomemajor facilitator superfamily mfs_12e-0757.4
NC_015387:2072237:2085508208550820867041197Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemajor facilitator superfamily MFS_14e-0756.2
NC_003909:927955:9473589473589485601203Bacillus cereus ATCC 10987, complete genomemultidrug resistance protein4e-0756.2
NC_013890:808791:8087918087918100621272Dehalococcoides sp. GT chromosome, complete genomemajor facilitator superfamily MFS_14e-0756.2
NC_013222:299683:3503113503113515251215Robiginitalea biformata HTCC2501, complete genomemultidrug-efflux transporter2e-0653.5
NC_014306:1810548:1821841182184118230761236Erwinia billingiae Eb661, complete genomeMajor facilitator superfamily transporter4e-0653.1
NC_008782:1566172:1566172156617215674971326Acidovorax sp. JS42, complete genomemajor facilitator superfamily MFS_14e-0652.8