Pre_GI: BLASTP Hits

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Query: NC_003197:1611302:1611996 Salmonella typhimurium LT2, complete genome

Start: 1611996, End: 1613798, Length: 1803

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016856:1621279:1621973162197316237751803Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hydrogenase-1 large subunit01252
NC_015761:1488807:1489501148950114913031803Salmonella bongori NCTC 12419, complete genomeuptake hydrogenase large subunit01245
NC_003198:1463253:1481216148121614830181803Salmonella enterica subsp. enterica serovar Typhi str. CT18,01241
NC_010067:1414000:1432066143206614338681803Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein01231
NC_013851:2610847:2627626262762626294161791Allochromatium vinosum DSM 180 chromosome, complete genomenickel-dependent hydrogenase large subunit0912
NC_008687:256692:2842862842862860791794Paracoccus denitrificans PD1222 chromosome 2, complete sequencenickel-dependent hydrogenase, large subunit0878
NC_010067:1116148:1117491111749111192841794Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0857
NC_011745:1055354:1076475107647510782681794Escherichia coli ED1a chromosome, complete genomehydrogenase 1 large subunit0857
NC_011353:1195179:1217407121740712192001794Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehydrogenase 1 large subunit0850
NC_017249:8358438:8362679836267983644691791Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein0849
NC_004463:1872537:1890021189002118918111791Bradyrhizobium japonicum USDA 110, complete genomeuptake hydrogenase large subunit homolog0849
NC_009720:2424975:2434794243479424366081815Xanthobacter autotrophicus Py2, complete genomenickel-dependent hydrogenase large subunit0810
NC_007973:1411714:1412448141244814143071860Ralstonia metallidurans CH34 chromosome 1, complete sequencenickel-dependent hydrogenase, large subunit0783
NC_011059:921690:9367969367969385141719Prosthecochloris aestuarii DSM 271, complete genomenickel-dependent hydrogenase large subunit0729
NC_011060:1947795:1949804194980419515221719Pelodictyon phaeoclathratiforme BU-1, complete genomenickel-dependent hydrogenase large subunit0717
NC_013851:2317091:2334118233411823358481731Allochromatium vinosum DSM 180 chromosome, complete genomenickel-dependent hydrogenase large subunit0683
NC_018515:3411276:3415156341515634168651710Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi,Fe-hydrogenase I large subunit0667
NC_019940:3660754:3660754366075436624841731Thioflavicoccus mobilis 8321 chromosome, complete genomeNi,Fe-hydrogenase I large subunit0655
NC_012483:3529895:3534810353481035365461737Acidobacterium capsulatum ATCC 51196, complete genomenickel-dependent hydrogenase, large subunit5e-174611
NC_015557:30622:4730847308492091902Hydrogenobaculum sp. 3684 chromosome, complete genomeCytochrome-c3 hydrogenase1e-168593
NC_015587:28997:4734447344492451902Hydrogenobaculum sp. SHO chromosome, complete genomeCytochrome-c3 hydrogenase1e-168593
NC_020411:28995:4734247342492431902Hydrogenobaculum sp. HO, complete genomenickel-dependent hydrogenase large subunit1e-168593
NC_013943:2610902:2617104261710426188041701Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomenickel-dependent hydrogenase large subunit2e-166586
NC_009921:4035225:4035225403522540369461722Frankia sp. EAN1pec, complete genomenickel-dependent hydrogenase large subunit8e-164577
NC_017192:1933106:1942487194248719442291743Arcobacter sp. L, complete genomeNi/Fe-hydrogenase large subunit3e-149529
NC_014541:1165991:1195311119531111970141704Ferrimonas balearica DSM 9799 chromosome, complete genomenickel-dependent hydrogenase large subunit5e-143508
NC_007626:1746475:1783667178366717853701704Magnetospirillum magneticum AMB-1, complete genomeNi,Fe-hydrogenase I large subunit2e-141503
NC_011740:2986514:3003102300310230048051704Escherichia fergusonii ATCC 35469, complete genomehydrogenase 2, large subunit2e-140499
NC_014216:1061265:1073924107392410756241701Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomenickel-dependent hydrogenase large subunit7e-137488
NC_010278:1467146:1488076148807614897851710Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase 2 large subunit3e-136486
NC_014836:1180454:1180454118045411821661713Desulfurispirillum indicum S5 chromosome, complete genomenickel-dependent hydrogenase large subunit3e-135483
NC_007575:1484305:1500993150099315027261734Sulfurimonas denitrificans DSM 1251, complete genomenickel-dependent hydrogenase, large subunit3e-132472
NC_009092:1989977:2015698201569820174041707Shewanella loihica PV-4, complete genomenickel-dependent hydrogenase, large subunit2e-128459
NC_014166:33138:3686436864385281665Arcobacter nitrofigilis DSM 7299 chromosome, complete genomenickel-dependent hydrogenase large subunit3e-125449
NC_014314:1:2040720407219781572Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completenickel-dependent hydrogenase large subunit8e-99361
NC_011830:2940500:2941256294125629428121557Desulfitobacterium hafniense DCB-2, complete genomeHydrogen:quinone oxidoreductase2e-93343
NC_018515:937994:9546529546529562141563Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi,Fe-hydrogenase I large subunit1e-86321
NC_014365:1094516:1113854111385411153561503Desulfarculus baarsii DSM 2075 chromosome, complete genomeCytochrome-c3 hydrogenase8e-84311
NC_015499:352934:3615833615833631451563Thermodesulfobium narugense DSM 14796 chromosome, complete genomeCytochrome-c3 hydrogenase7e-82305
NC_014216:608740:6111626111626126731512Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomenickel-dependent hydrogenase large subunit9e-82305
NC_021182:1761789:1770582177058217719971416Clostridium pasteurianum BC1, complete genomeNi,Fe-hydrogenase I large subunit8e-69261
NC_021182:1983456:1991930199193019933451416Clostridium pasteurianum BC1, complete genomeNi,Fe-hydrogenase I large subunit8e-69261
NC_013173:2261396:2262578226257822641221545Desulfomicrobium baculatum DSM 4028, complete genomenickel-dependent hydrogenase large subunit5e-68259
NC_013741:838243:8434618434618451851725Archaeoglobus profundus DSM 5631, complete genomenickel-dependent hydrogenase large subunit9e-49195
NC_021184:1257722:1264757126475712661511395Desulfotomaculum gibsoniae DSM 7213, complete genomeNi,Fe-hydrogenase I large subunit8e-47188
NC_013894:1288282:1311215131121513128491635Thermocrinis albus DSM 14484 chromosome, complete genomeCytochrome-c3 hydrogenase2e-46187
NC_003901:2533000:2572533257253325743081776Methanosarcina mazei Go1, complete genomeF420-nonreducing hydrogenase II, large subunit6e-46186
NC_013222:229190:2546542546542565281875Robiginitalea biformata HTCC2501, complete genomeputative cytochrome C3-like [NiFe] hydrogenase large subunit7e-45182
NC_015312:6717973:6728776672877667303831608Pseudonocardia dioxanivorans CB1190 chromosome, complete genomecytochrome-c3 hydrogenase3e-41170
NC_008340:2272692:2281880228188022833281449Alkalilimnicola ehrlichei MLHE-1, complete genomenickel-dependent hydrogenase, large subunit1e-40168
NC_007413:5742406:5750246575024657518411596Anabaena variabilis ATCC 29413, complete genomeNickel-dependent hydrogenase, large subunit2e-40167
NC_008595:2687245:2717507271750727193031797Mycobacterium avium 104, complete genomehydrogen:quinone oxidoreductase3e-39163
NC_008701:168662:1860531860531879691917Pyrobaculum islandicum DSM 4184, complete genomenickel-dependent hydrogenase, large subunit9e-26119
NC_008687:256692:2792912792912807241434Paracoccus denitrificans PD1222 chromosome 2, complete sequencenickel-dependent hydrogenase, large subunit9e-24112
NC_014972:2328228:2360916236091623623431428Desulfobulbus propionicus DSM 2032 chromosome, complete genomeNAD(P)-dependent nickel-iron dehydrogenase catalytic subunit5e-21103
NC_009135:620312:6253846253846267991416Methanococcus maripaludis C5, complete genomenickel-dependent hydrogenase, large subunit2e-1894.7
NC_009634:53555:6988669886713011416Methanococcus vannielii SB chromosome, complete genomenickel-dependent hydrogenase large subunit3e-1894
NC_014222:613448:6231756231756245961422Methanococcus voltae A3 chromosome, complete genomenickel-dependent hydrogenase large subunit3e-1893.6
NC_015562:1189111:1202201120220112036221422Methanotorris igneus Kol 5 chromosome, complete genomehydrogen dehydrogenase6e-1892.8
NC_013887:189400:2005792005792019971419Methanocaldococcus sp. FS406-22 chromosome, complete genomenickel-dependent hydrogenase large subunit7e-1892.8
NC_015636:175660:1818451818451832691425Methanothermococcus okinawensis IH1 chromosome, complete genomehydrogen dehydrogenase1e-1791.7
NC_013156:226215:2339512339512352071257Methanocaldococcus fervens AG86, complete genomenickel-dependent hydrogenase large subunit2e-1791.3
NC_015562:899030:9358029358029370611260Methanotorris igneus Kol 5 chromosome, complete genomehydrogen dehydrogenase3e-1790.9
NC_009635:94937:1041191041191055461428Methanococcus aeolicus Nankai-3 chromosome, complete genomenickel-dependent hydrogenase large subunit3e-1790.5
NC_013887:812091:8214898214898227451257Methanocaldococcus sp. FS406-22 chromosome, complete genomenickel-dependent hydrogenase large subunit4e-1790.5
NC_013407:1478811:1487583148758314888391257Methanocaldococcus vulcanius M7, complete genomenickel-dependent hydrogenase large subunit7e-1789.4
NC_009635:1283830:1285097128509712863531257Methanococcus aeolicus Nankai-3 chromosome, complete genomenickel-dependent hydrogenase large subunit1e-1689
NC_009634:1002295:1011195101119510124511257Methanococcus vannielii SB chromosome, complete genomenickel-dependent hydrogenase large subunit2e-1687.8
NC_014222:1411155:1419642141964214209041263Methanococcus voltae A3 chromosome, complete genomenickel-dependent hydrogenase large subunit4e-1687
NC_014658:701020:7083197083197097371419Methanothermus fervidus DSM 2088 chromosome, complete genomef420-non-reducing hydrogenase subunit a7e-1686.3
NC_009637:920423:9286299286299298851257Methanococcus maripaludis C7 chromosome, complete genomenickel-dependent hydrogenase large subunit1e-1585.5
NC_009135:1654131:1664295166429516655511257Methanococcus maripaludis C5, complete genomenickel-dependent hydrogenase, large subunit1e-1585.1
NC_012108:1324885:1329332132933213306811350Desulfobacterium autotrophicum HRM2, complete genomeMvhA2e-1584.7
NC_015847:1712023:1719696171969617209521257Methanococcus maripaludis XI chromosome, complete genomeF420-non-reducing hydrogenase subunit alpha2e-1584.3
NC_005791:1626448:1634132163413216353881257Methanococcus maripaludis S2, complete genomeF420-non-reducing hydrogenase subunit alpha2e-1584.3
NC_009975:917337:9270539270539283091257Methanococcus maripaludis C6, complete genomenickel-dependent hydrogenase large subunit3e-1584
NC_015636:832224:8408908408908421461257Methanothermococcus okinawensis IH1 chromosome, complete genomehydrogen dehydrogenase4e-1583.6
NC_013926:71186:7848978489797541266Aciduliprofundum boonei T469 chromosome, complete genomenickel-dependent hydrogenase large subunit1e-1482.4
NC_015499:1372361:1378098137809813796301533Thermodesulfobium narugense DSM 14796 chromosome, complete genomeHydrogen dehydrogenase2e-1480.9
NC_015320:1399589:1409046140904614105061461Archaeoglobus veneficus SNP6 chromosome, complete genomehydrogen dehydrogenase4e-1480.1
NC_007681:1455425:1467211146721114684311221Methanosphaera stadtmanae DSM 3091, complete genomeFrhA1e-1378.6
NC_003551:154883:1728651728651741691305Methanopyrus kandleri AV19, complete genomeCoenzyme F420-reducing hydrogenase, alpha subunit3e-1273.9
NC_011729:4591500:4607618460761846090421425Cyanothece sp. PCC 7424 chromosome, complete genomenickel-dependent hydrogenase large subunit4e-1273.6
NC_014122:341365:3483463483463495901245Methanocaldococcus infernus ME chromosome, complete genomenickel-dependent hydrogenase large subunit7e-1272.8
NC_009635:1067334:1077463107746310786201158Methanococcus aeolicus Nankai-3 chromosome, complete genomenickel-dependent hydrogenase large subunit2e-1171.6
NC_013741:1304000:1311096131109613125651470Archaeoglobus profundus DSM 5631, complete genomenickel-dependent hydrogenase large subunit2e-1171.2
NC_017192:1933106:1945722194572219470771356Arcobacter sp. L, complete genomeNi/Fe-dependent hydrogenase large subunit3e-1170.9
NC_010581:561579:5623755623755636641290Beijerinckia indica subsp. indica ATCC 9039, complete genomenickel-dependent hydrogenase large subunit9e-1168.9
NC_015636:175660:1786731786731799051233Methanothermococcus okinawensis IH1 chromosome, complete genomecoenzyme F420 hydrogenase subunit alpha6e-1066.2
NC_015574:2262742:2267469226746922686141146Methanobacterium sp. SWAN-1 chromosome, complete genomeNADH dehydrogenase (quinone)1e-0965.1
NC_009135:620312:6224326224326236641233Methanococcus maripaludis C5, complete genomenickel-dependent hydrogenase, large subunit2e-0965.1
NC_014222:613448:6267466267466279781233Methanococcus voltae A3 chromosome, complete genomecoenzyme F420 hydrogenase, subunit alpha2e-0964.3
NC_011666:3001513:3024573302457330260391467Methylocella silvestris BL2, complete genomenickel-dependent hydrogenase large subunit5e-0963.2
NC_015562:1189111:1205518120551812067501233Methanotorris igneus Kol 5 chromosome, complete genomecoenzyme F420 hydrogenase subunit alpha5e-0963.2
NC_015636:14000:2619326193273141122Methanothermococcus okinawensis IH1 chromosome, complete genomeNADH dehydrogenase (quinone)9e-0962.4
NC_014011:1264165:1289029128902912902671239Aminobacterium colombiense DSM 12261 chromosome, complete genomeNADH dehydrogenase (quinone)1e-0862.4
NC_007355:544796:5501865501865515561371Methanosarcina barkeri str. fusaro chromosome 1, complete sequencecoenzyme F420 hydrogenase, subunit alpha1e-0861.6
NC_003552:1157294:1165692116569211670621371Methanosarcina acetivorans C2A, complete genomecoenzyme F420 hydrogenase, subunit alpha5e-0860.1
NC_009348:1893292:1893292189329218950101719Aeromonas salmonicida subsp. salmonicida A449, complete genomeformate hydrogenlyase subunit 5 precursor5e-0860.1
NC_014507:457122:4715664715664726481083Methanoplanus petrolearius DSM 11571 chromosome, complete genomeNADH-ubiquinone oxidoreductase subunit 49kDa4e-0860.1
NC_007681:1608223:1615375161537516165261152Methanosphaera stadtmanae DSM 3091, complete genomeEhbN4e-0860.1
NC_011296:1299388:1323636132363613251561521Thermodesulfovibrio yellowstonii DSM 11347, complete genomeF420-non-reducing hydrogenase subunit A, selenocysteine-containing4e-0860.1
NC_003413:857480:8665258665258678111287Pyrococcus furiosus DSM 3638, complete genomesulfhydrogenase alpha subunit2e-0758.5
NC_008570:2768795:2787320278732027890381719Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehydrogenase-4 component G2e-0758.2
NC_015424:2357600:2385224238522423869421719Aeromonas veronii B565 chromosome, complete genomeformate hydrogenlyase subunit 52e-0757.8
NC_000909:446364:4576224576224587641143Methanocaldococcus jannaschii DSM 2661, complete genomecarbon monoxide dehydrogenase, hydrogenase subunit CooH (cooH)4e-0757
NC_013887:245236:2784542784542795871134Methanocaldococcus sp. FS406-22 chromosome, complete genomeNADH-ubiquinone oxidoreductase chain 49kDa4e-0757
NC_013926:614206:6390836390836403271245Aciduliprofundum boonei T469 chromosome, complete genomeNADH dehydrogenase (quinone)5e-0756.6
NC_016587:523215:5506295506295517081080Azospirillum lipoferum 4B plasmid AZO_p4, complete sequenceCarbon monoxide-induced hydrogenase, CooH subunit8e-0756.2
NC_015636:1061736:1071558107155810726941137Methanothermococcus okinawensis IH1 chromosome, complete genomeNADH dehydrogenase (quinone)1e-0655.5
NC_015958:141500:1452091452091463001092Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeNADH-ubiquinone oxidoreductase chain 49kDa1e-0655.5
NC_014209:1580423:1590309159030915913911083Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,NADH-ubiquinone oxidoreductase chain 49kDa2e-0655.1
NC_013921:1614397:1624335162433516254171083Thermoanaerobacter italicus Ab9 chromosome, complete genomeNADH-ubiquinone oxidoreductase chain 49kDa2e-0655.1
NC_009712:2092440:2096061209606120973771317Candidatus Methanoregula boonei 6A8, complete genomenickel-dependent hydrogenase, large subunit4e-0653.5
NC_019940:3660754:3675893367589336769751083Thioflavicoccus mobilis 8321 chromosome, complete genomeNi,Fe-hydrogenase III large subunit5e-0653.1