Pre_GI: BLASTP Hits

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Query: NC_002971:1523065:1525550 Coxiella burnetii RSA 493, complete genome

Start: 1525550, End: 1526494, Length: 945

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007484:755058:775264775264776262999Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein2e-68259
NC_009483:2489000:2517302251730225186211320Geobacter uraniireducens Rf4 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein2e-54213
NC_011901:1860887:1859616185961618608901275Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein8e-54211
NC_011146:4505821:4525715452571545269441230Geobacter bemidjiensis Bem, complete genomeErfK/YbiS/YcfS/YnhG family protein8e-54210
NC_012918:4648220:4661097466109746623261230Geobacter sp. M21 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein5e-52204
NC_009348:1347500:135138913513891352306918Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein7e-52204
NC_012917:2786283:2804764280476428057861023Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeErfK/YbiS/YcfS/YnhG family protein1e-50200
NC_013421:2972269:3005361300536130063831023Pectobacterium wasabiae WPP163, complete genomeErfK/YbiS/YcfS/YnhG family protein4e-50198
NC_016002:1938749:196025419602541961246993Pseudogulbenkiania sp. NH8B, complete genomeYkuD family protein7e-47187
NC_009348:3819271:383658138365813837507927Aeromonas salmonicida subsp. salmonicida A449, complete genomepeptidoglycan-binding LysM2e-43176
NC_011094:2061000:207582520758252076754930Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-43176
NC_011149:2040396:205413720541372055066930Salmonella enterica subsp. enterica serovar Agona str. SL483,protein ErfK/srfK3e-43176
NC_016832:948029:949926949926950855930Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,L,D-transpeptidase ErfK/SrfK1e-42174
NC_004631:948054:949972949972950901930Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-42174
NC_013364:928486:934902934902935822921Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-42174
NC_015663:4906652:492354349235434924484942Enterobacter aerogenes KCTC 2190 chromosome, complete genomeL,D-transpeptidase2e-42173
AP010958:922937:929353929353930273921Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein1e-42173
NC_013353:922937:929353929353930273921Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-42173
NC_020063:2077233:208972220897222090687966Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein3e-42172
NC_007712:1712667:1730410173041017315371128Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein8e-42171
NC_011283:1811000:188336118833611884296936Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein9e-42171
NC_021066:601029:605224605224606165942Raoultella ornithinolytica B6, complete genomeL,D-transpeptidase4e-41168
NC_008570:4009762:4024593402459340256271035Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeLysM domain protein5e-41168
NC_011601:2139188:217742621774262178358933Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein8e-41167
NC_007946:2155454:216844421684442169379936Escherichia coli UTI89, complete genomehypothetical protein7e-41167
NC_004431:2304280:231727923172792318214936Escherichia coli CFT073, complete genomeProtein erfK/srfK precursor7e-41167
NC_008253:2056734:206975620697562070691936Escherichia coli 536, complete genomeprotein ErfK/SrfK precursor7e-41167
NC_009800:2083465:210099321009932101925933Escherichia coli HS, complete genomeErfK/YbiS/YcfS/YnhG family protein7e-41167
CP002797:2062006:206338120633812064313933Escherichia coli NA114, complete genomehypothetical protein6e-41167
NC_013353:2455052:245747824574782458410933Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-40166
AP010958:2455052:245747824574782458410933Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved hypothetical protein ErfK2e-40166
NC_016822:2201388:224050722405072241439933Shigella sonnei 53G, complete genomeL,D-transpeptidase2e-40166
NC_012947:1769438:177133417713341772269936Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein7e-40164
AC_000091:2027648:206452820645282065460933Escherichia coli W3110 DNA, complete genomeconserved hypothetical protein with NAD(P)-binding Rossmann-fold domain7e-40164
NC_000913:2042935:206041520604152061347933Escherichia coli K12, complete genomeconserved protein with NAD(P)-binding Rossmann-fold domain7e-40164
NC_010473:2119480:215142321514232152355933Escherichia coli str. K-12 substr. DH10B, complete genomeconserved protein with NAD(P)-binding Rossmann-fold domain7e-40164
NC_011745:2209288:226943222694322270364933Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-40164
NC_012759:1920955:195289819528981953830933Escherichia coli BW2952 chromosome, complete genomehypothetical protein7e-40164
NC_012967:1967675:200039120003912001323933Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein7e-40164
NC_010468:1816359:181880018188001819723924Escherichia coli ATCC 8739, complete genomeErfK/YbiS/YcfS/YnhG family protein2e-39163
NC_016612:5296076:531862453186245319565942Klebsiella oxytoca KCTC 1686 chromosome, complete genomeL,D-transpeptidase2e-38159
NC_014923:1680095:1680095168009516816001506Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeErfK/YbiS/YcfS/YnhG family protein2e-1583.2
NC_011894:200928:204335204335205126792Methylobacterium nodulans ORS 2060, complete genomeErfK/YbiS/YcfS/YnhG family protein4e-1582.4
NC_006510:3321426:332186033218603322357498Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-1480.5
NC_019896:2579036:259286725928672593370504Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeSpore protein YkuD3e-1479.3
NC_012793:3243727:325708732570873257584498Geobacillus sp. WCH70, complete genomeErfK/YbiS/YcfS/YnhG family protein4e-1479.3
NC_020210:3341976:334737533473753347872498Geobacillus sp. GHH01, complete genomeputative L,D-transpeptidase Ldt8e-1478.2
NC_012811:1105395:112850911285091129255747Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein2e-1376.6
NC_000964:1474451:147581914758191476313495Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-1375.9
NC_015675:1721543:1721543172154317230601518Mesorhizobium opportunistum WSM2075 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein6e-1375.1
NC_019973:1731626:1731626173162617331971572Mesorhizobium australicum WSM2073, complete genomehypothetical protein7e-1375.1
NC_012988:4353000:437534843753484376079732Methylobacterium extorquens DM4, complete genomehypothetical protein1e-1273.9
NC_008254:3246306:3260010326001032614821473Mesorhizobium sp. BNC1, complete genomeErfK/YbiS/YcfS/YnhG3e-1273.2
NC_009667:1076718:1079542107954210810081467Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceErfK/YbiS/YcfS/YnhG family protein3e-1272.8
NC_002678:2739829:2764101276410127656181518Mesorhizobium loti MAFF303099, complete genomehypothetical protein3e-1272.8
NC_003317:190975:194810194810195670861Brucella melitensis 16M chromosome I, complete sequencePROTEIN ERFK/SRFK4e-1272.4
NC_015857:1809500:1828886182888618303191434Brucella pinnipedialis B2/94 chromosome chromosome 1, completeErfK/YbiS/YcfS/YnhG family protein1e-1171.2
NC_004310:1777721:1798125179812517993511227Brucella suis 1330 chromosome I, complete sequencehypothetical protein1e-1170.5
NC_010103:1777000:1796300179630017975261227Brucella canis ATCC 23365 chromosome I, complete sequenceATP synthase subunits region ORF 51e-1170.5
NC_010169:1599936:1614082161408216153081227Brucella suis ATCC 23445 chromosome I, complete sequenceATP synthase subunits region ORF 52e-1170.5
NC_010742:1794000:1813271181327118147041434Brucella abortus S19 chromosome 1, complete sequenceErfK/YbiS/YcfS/YnhG2e-1170.1
NC_007618:1792500:1812111181211118133371227Brucella melitensis biovar Abortus 2308 chromosome I, completeErfK/YbiS/YcfS/YnhG3e-1169.3
NC_006932:1795500:1814983181498318162091227Brucella abortus biovar 1 str. 9-941 chromosome I, completehypothetical protein3e-1169.3
NC_015565:2027279:207794920779492078833885Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeErfK/YbiS/YcfS/YnhG family protein1e-1067.4
NC_015589:2878000:289307328930732893954882Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein2e-1066.6
NC_010505:5077162:508577750857775086580804Methylobacterium radiotolerans JCM 2831, complete genomeErfK/YbiS/YcfS/YnhG family protein4e-1065.9
NC_014923:1249267:126104712610471261634588Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete9e-1064.3
NC_012808:1220378:126495612649561265777822Methylobacterium extorquens AM1, complete genomehypothetical protein1e-0861.2
NC_010511:4696868:470105347010534701763711Methylobacterium sp. 4-46 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein1e-0860.8
NC_021171:1661923:166412816641281664484357Bacillus sp. 1NLA3E, complete genomeErfK/YbiS/YcfS/YnhG family protein2e-0860.1
NC_012988:670101:689280689280690128849Methylobacterium extorquens DM4, complete genomehypothetical protein2e-0860.1
NC_010172:3946644:396958839695883970361774Methylobacterium extorquens PA1, complete genomeErfK/YbiS/YcfS/YnhG family protein2e-0859.7
NC_008536:2717891:273476727347672735720954Solibacter usitatus Ellin6076, complete genomeErfK/YbiS/YcfS/YnhG family protein7e-0858.2
NC_013791:2839516:284500328450032845497495Bacillus pseudofirmus OF4 chromosome, complete genomeUncharacterized erfK/srfK family protein, probably secreted3e-0756.2
NC_013411:284461:317145317145317651507Geobacillus sp. Y412MC61, complete genomeErfK/YbiS/YcfS/YnhG family protein6e-0755.1
NC_008319:1574908:157605115760511576644594Synechococcus sp. CC9311, complete genomeATP synthase9e-0754.7
NC_021182:1188000:119687011968701197244375Clostridium pasteurianum BC1, complete genomehypothetical protein3e-0652.8