Pre_GI: BLASTP Hits

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Query: NC_002950:1334500:1344747 Porphyromonas gingivalis W83, complete genome

Start: 1344747, End: 1344820, Length: 74

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015501:1341661:13541861354186135426277Porphyromonas asaccharolytica DSM 20707 chromosome, completetRNA-Ile3e-0650.4
NC_014734:183214:19369019369019376677Paludibacter propionicigenes WB4 chromosome, complete genometRNA-Ile3e-0650.4
NC_014734:2285762:22949502294950229502677Paludibacter propionicigenes WB4 chromosome, complete genometRNA-Ile3e-0650.4
NC_014734:1428282:14384971438497143857377Paludibacter propionicigenes WB4 chromosome, complete genometRNA-Ile3e-0650.4
NC_014933:270000:28158028158028165374Bacteroides helcogenes P 36-108 chromosome, complete genometRNA-Ile4e-0650.1
NC_002950:1748582:17554181755418175549174Porphyromonas gingivalis W83, complete genometRNA-Ile4e-0650.1
NC_015571:2273503:22823032282303228237674Porphyromonas gingivalis TDC60, complete genometRNA-Ile4e-0650.1
NC_004663:4977635:49851204985120498519374Bacteroides thetaiotaomicron VPI-5482, complete genometRNA-Ile4e-0650.1
NC_015571:1265121:12769341276934127700774Porphyromonas gingivalis TDC60, complete genometRNA-Ile4e-0650.1
NC_010729:1549744:15582481558248155832174Porphyromonas gingivalis ATCC 33277, complete genometRNA-Ile4e-0650.1
NC_014933:3755000:37658113765811376588474Bacteroides helcogenes P 36-108 chromosome, complete genometRNA-Ile4e-0650.1
NC_002950:115917:12159512159512166874Porphyromonas gingivalis W83, complete genometRNA-Ile4e-0650.1
NC_010729:225616:23134823134823142174Porphyromonas gingivalis ATCC 33277, complete genometRNA-Ile4e-0650.1