Pre_GI: BLASTP Hits

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Query: NC_002947:4293252:4303152 Pseudomonas putida KT2440, complete genome

Start: 4303152, End: 4304300, Length: 1149

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011887:110618:1196411196411207951155Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete2e-80299
NC_008148:792610:8041138041138053991287Rubrobacter xylanophilus DSM 9941, complete genomeSarcosine oxidase7e-27121
NC_020211:2012480:2038214203821420393291116Serratia marcescens WW4, complete genomeFAD-binding N-methyltryptophan oxidase1e-25117
NC_014623:6509000:6511911651191165130321122Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesarcosine oxidase1e-25117
NC_003143:2741478:2747130274713027482451116Yersinia pestis CO92, complete genomeputative sarcosine oxidase1e-24114
NC_005810:2508671:2517054251705425181691116Yersinia pestis biovar Microtus str. 91001, complete genomeN-methyltryptophan oxidase1e-24114
NC_008150:2173708:2177647217764721787621116Yersinia pestis Antiqua, complete genomeputative sarcosine oxidase1e-24114
NC_017168:2999514:3014188301418830153031116Yersinia pestis A1122 chromosome, complete genomeN-methyltryptophan oxidase1e-24114
NC_004088:1909880:1923586192358619247011116Yersinia pestis KIM, complete genomesarcosine oxidase-like protein1e-24114
NC_007492:2629350:2635450263545026366101161Pseudomonas fluorescens PfO-1, complete genomeSarcosine oxidase7e-24111
NC_008009:5139896:5153936515393651550271092Acidobacteria bacterium Ellin345, complete genomeFAD dependent oxidoreductase5e-1582.4
NC_008148:1567703:1577597157759715787811185Rubrobacter xylanophilus DSM 9941, complete genomeSarcosine oxidase3e-1273.2
NC_008319:262894:2794732794732806271155Synechococcus sp. CC9311, complete genomeputative sarcosine oxidase8e-0962