Pre_GI: BLASTP Hits

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Query: NC_002528:505951:514189 Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete

Start: 514189, End: 514806, Length: 618

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is found in the pea aphid, Acyrthosiphon pisum.Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017253:509494:515090515090515737648Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,cytochrome O ubiquinol oxidase subunit III9e-74276
NC_017256:515579:514965514965515582618Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,cytochrome O ubiquinol oxidase subunit III1e-61236
NC_017259:480656:493088493088493708621Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,cytochrome O ubiquinol oxidase subunit III6e-41167
NC_004061:498483:515322515322515891570Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomecytochrome O ubiquinol oxidase C5e-40164
NC_015663:2694373:272570627257062726317612Enterobacter aerogenes KCTC 2190 chromosome, complete genomecytochrome o ubiquinol oxidase subunit III1e-32139
NC_004741:366822:380831380831381445615Shigella flexneri 2a str. 2457T, complete genomecytochrome o ubiquinol oxidase subunit III1e-32139
NC_004337:367687:381698381698382312615Shigella flexneri 2a str. 301, complete genomecytochrome o ubiquinol oxidase subunit III1e-32139
NC_008258:401786:419349419349419963615Shigella flexneri 5 str. 8401, complete genomecytochrome o ubiquinol oxidase subunit III1e-32139
NC_017328:385552:399562399562400176615Shigella flexneri 2002017 chromosome, complete genomeCytochrome o ubiquinol oxidase subunit 31e-32139
NC_020181:2714559:271952727195272720402876Enterobacter aerogenes EA1509E, complete genomeCytochrome O ubiquinol oxidase subunit III6e-32137
NC_012779:2127542:213849821384982139115618Edwardsiella ictaluri 93-146, complete genomecytochrome o ubiquinol oxidase, subunit III, putative6e-32137
NC_010943:1379707:139674013967401397378639Stenotrophomonas maltophilia K279a, complete genomeputative quinol oxidase subunit 34e-30130
NC_007508:1446526:146733514673351467961627Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecytochrome O ubiquinol oxidase subunit III3e-29128
NC_004129:5781413:579255157925515793177627Pseudomonas fluorescens Pf-5, complete genomecytochrome o ubiquinol oxidase, subunit III2e-29128
NC_015723:1047418:105053310505331051189657Cupriavidus necator N-1 chromosome 2, complete sequencecytochrome o ubiquinol oxidase subunit2e-26119
NC_009654:91096:102866102866103477612Marinomonas sp. MWYL1, complete genomecytochrome o ubiquinol oxidase subunit III2e-26118
NC_015497:3614817:362317336231733623820648Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecytochrome o ubiquinol oxidase, subunit III7e-26117
NC_015422:2326942:234783423478342348466633Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome o ubiquinol oxidase subunit III4e-26117
NC_014910:2045088:206447120644712065103633Alicycliphilus denitrificans BC chromosome, complete genomecytochrome o ubiquinol oxidase, subunit iii4e-26117
NC_016632:1049510:104890310489031049520618Serratia symbiotica str. 'Cinara cedri' chromosome, completecytochrome o ubiquinol oxidase subunit III7e-24110
NC_015675:4493758:449623544962354496921687Mesorhizobium opportunistum WSM2075 chromosome, complete genomecytochrome c oxidase subunit III2e-2099.4
NC_005956:152497:166493166493167158666Bartonella henselae str. Houston-1, complete genomeCytochrome o ubiquinol oxidase subunit III4e-1994.4
NC_018677:111500:145982145982146527546Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeCytochrome O ubiquinol oxidase subunit III5e-1994
NC_020300:131782:146048146048146713666Bartonella australis Aust/NH1, complete genomecytochrome o ubiquinol oxidase subunit III1e-1892.8
NC_005955:139907:153917153917154582666Bartonella quintana str. Toulouse, complete genomeCytochrome o ubiquinol oxidase subunit III2e-1892.4
NC_013205:526281:570422570422571030609Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,cytochrome c oxidase subunit III7e-1580.5
NC_002976:638799:638204638204638809606Staphylococcus epidermidis RP62A, complete genomequinol oxidase, subunit III2e-1168.9
NC_020164:1784223:180459018045901805195606Staphylococcus warneri SG1, complete genomeputative quinol oxidase polypeptide III2e-1168.9
NC_004461:746284:745689745689746294606Staphylococcus epidermidis ATCC 12228, complete genomequinol oxidase polypeptide III QoxC2e-1168.9
NC_015850:2259769:227444422744442275079636Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome O ubiquinol oxidase subunit III1e-1066.6
NC_015942:1047576:105707210570721057710639Acidithiobacillus ferrivorans SS3 chromosome, complete genomecytochrome c oxidase subunit III4e-1064.7
NC_015850:169180:189558189558190196639Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome O ubiquinol oxidase subunit III6e-1063.9
NC_017190:1465079:152565915256591526282624Bacillus amyloliquefaciens LL3 chromosome, complete genomecytochrome caa3 oxidase (subunit III)3e-0755.1