Pre_GI: BLASTP Hits

Some Help

Query: NC_001263:132288:153816 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 153816, End: 154889, Length: 1074

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017171:280762:2979912979912990761086Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomepyrimidine deaminase4e-55215
NC_010611:240839:2681372681372692221086Acinetobacter baumannii ACICU, complete genomePyrimidine deaminase4e-55215
NC_011586:268927:3303983303983314831086Acinetobacter baumannii AB0057 chromosome, complete genomeriboflavin biosynthesis protein RibD4e-55215
NC_007498:1666242:1690093169009316912081116Pelobacter carbinolicus DSM 2380, complete genomeriboflavin biosynthesis protein RibD5e-52204
NC_014532:3036109:3043765304376530449191155Halomonas elongata DSM 2581, complete genomeriboflavin biosynthesis protein RibD3e-51202
NC_018870:1417851:1425375142537514265231149Thermacetogenium phaeum DSM 12270 chromosome, complete genomeriboflavin biosynthesis protein RibD1e-50200
NC_008340:420126:4201264201264212351110Alkalilimnicola ehrlichei MLHE-1, complete genomeriboflavin biosynthesis protein RibD5e-50198
NC_008309:1155218:1157428115742811585581131Haemophilus somnus 129PT, complete genomeriboflavin biosynthesis protein2e-49196
NC_014393:3494863:3494863349486334959571095Clostridium cellulovorans 743B chromosome, complete genomeriboflavin biosynthesis protein RibD3e-48192
NC_007651:1726472:1741844174184417429801137Burkholderia thailandensis E264 chromosome I, complete sequenceriboflavin biosynthesis protein RibD8e-48191
NC_014614:478578:4824884824884836361149Clostridium sticklandii, complete genomefused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase9e-48191
NC_020181:2714559:2755037275503727561401104Enterobacter aerogenes EA1509E, complete genomeDiaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase1e-47190
NC_015958:11511:2457424574256561083Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeriboflavin biosynthesis protein RibD3e-47189
NC_007510:973828:9889559889559900761122Burkholderia sp. 383 chromosome 1, complete sequenceRiboflavin biosynthesis protein RibD/Riboflavin-specific deaminase1e-46187
NC_012721:770651:7734307734307745841155Burkholderia glumae BGR1 chromosome 2, complete genomePutative deaminase2e-46186
NC_015555:4478:2168721687227691083Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeriboflavin biosynthesis protein RibD2e-45182
NC_015696:105748:1057481057481068181071Francisella sp. TX077308 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase4e-45182
NC_016148:951446:9544599544599555921134Thermovirga lienii DSM 17291 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase5e-45181
NC_004193:375416:4495624495624506651104Oceanobacillus iheyensis HTE831, complete genomeriboflavin specific deaminase8e-45181
NC_014761:1715377:1732927173292717340691143Oceanithermus profundus DSM 14977 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase4e-44179
NC_008312:2511500:2526786252678625279101125Trichodesmium erythraeum IMS101, complete genomeriboflavin biosynthesis protein RibD4e-44178
NC_015873:1901939:1919263191926319203991137Megasphaera elsdenii DSM 20460, complete genomeriboflavin biosynthesis protein RibD6e-44178
NC_013422:2004478:2004478200447820056381161Halothiobacillus neapolitanus c2, complete genomeriboflavin biosynthesis protein RibD7e-44178
NC_009633:1058000:1065408106540810665081101Alkaliphilus metalliredigens QYMF chromosome, complete genomeriboflavin biosynthesis protein RibD1e-43177
NC_018607:2578433:2585780258578025868771098Brachyspira pilosicoli B2904 chromosome, complete genomeriboflavin biosynthesis protein RibD1e-43177
NC_011027:760221:7607577607577618721116Chlorobaculum parvum NCIB 8327, complete genomeriboflavin biosynthesis protein RibD1e-43177
NC_011369:1135592:1190345119034511915591215Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeriboflavin biosynthesis protein RibD8e-44177
NC_018604:233769:2426132426132437101098Brachyspira pilosicoli WesB complete genomeriboflavin biosynthesis protein RibD2e-43176
NC_009848:775000:7826457826457837301086Bacillus pumilus SAFR-032, complete genomebifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase2e-43176
NC_014828:637523:6635106635106646131104Ethanoligenens harbinense YUAN-3 chromosome, complete genomeriboflavin biosynthesis protein RibD5e-43175
NC_013446:1173377:1178152117815211792611110Comamonas testosteroni CNB-2, complete genomeriboflavin biosynthesis protein RibD1e-42174
NC_010682:701912:7049167049167060281113Ralstonia pickettii 12J chromosome 1, complete sequenceriboflavin biosynthesis protein RibD9e-43174
NC_012856:737170:7414027414027425141113Ralstonia pickettii 12D chromosome 1, complete genomeriboflavin biosynthesis protein RibD9e-43174
NC_014410:8694:2175521755228251071Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,riboflavin biosynthesis protein RibD7e-43174
NC_019970:8938:2198121981230511071Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeriboflavin biosynthesis protein RibD6e-43174
NC_007912:4396972:4398792439879243998891098Saccharophagus degradans 2-40, complete genomeDiaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase2e-42173
NC_019902:2943719:2964369296436929655231155Thioalkalivibrio nitratireducens DSM 14787, complete genomeDiaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase6e-42171
NC_008752:3902637:3928561392856139296941134Acidovorax avenae subsp. citrulli AAC00-1, complete genomeriboflavin biosynthesis protein RibD6e-42171
NC_014311:2733897:2753254275325427543661113Ralstonia solanacearum PSI07 chromosome, complete genomebifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase3e-41169
NC_008781:3056407:3070810307081030719221113Polaromonas naphthalenivorans CJ2, complete genomeriboflavin biosynthesis protein RibD9e-41167
NC_018704:896209:9197619197619208131053Amphibacillus xylanus NBRC 15112, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase2e-40166
NC_010002:5752363:5765221576522157663301110Delftia acidovorans SPH-1, complete genomeriboflavin biosynthesis protein RibD2e-40166
NC_016593:2370000:2373364237336423745061143Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeriboflavin biosynthesis protein RibD3e-39162
NC_015563:1595500:1601025160102516021131089Delftia sp. Cs1-4 chromosome, complete genomeriboflavin biosynthesis protein RibD3e-39162
NC_015138:3927411:3939182393918239403151134Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeriboflavin biosynthesis protein RibD2e-39162
NC_014330:1541874:1551073155107315521701098Brachyspira pilosicoli 95/1000 chromosome, complete genomeriboflavin biosynthesis protein RibD2e-39162
NC_006831:157895:1749901749901761021113Ehrlichia ruminantium str. Gardel, complete genomeRiboflavin biosynthesis protein ribD5e-39161
NC_006832:160222:1776651776651787771113Ehrlichia ruminantium str. Welgevonden, complete genomeRiboflavin biosynthesis protein ribD1e-38160
NC_010718:128423:1455661455661467081143Natranaerobius thermophilus JW/NM-WN-LF, complete genomeriboflavin biosynthesis protein RibD2e-38159
NC_006624:324267:3505433505433516041062Thermococcus kodakarensis KOD1, complete genomeriboflavin biosynthesis protein RibD2e-38159
NC_014976:403919:4073104073104083951086Bacillus subtilis BSn5 chromosome, complete genomebifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase5e-38158
NC_011666:2259447:2281600228160022827121113Methylocella silvestris BL2, complete genomeriboflavin biosynthesis protein RibD1e-37157
NC_017195:2273216:2275582227558222766671086Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeriboflavin biosynthesis protein RibD2e-37157
NC_014657:473479:4930704930704941851116Caldicellulosiruptor owensensis OL chromosome, complete genomeriboflavin biosynthesis protein ribd1e-36154
NC_008782:3361850:3374521337452133756211101Acidovorax sp. JS42, complete genomeriboflavin biosynthesis protein RibD7e-37154
UCMB5137:1834999:1835657183565718367481092Bacillus atrophaeus UCMB-5137BATR1942_09520; fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase; (location [1891303:182e-36153
NC_015571:440605:462682462682463674993Porphyromonas gingivalis TDC60, complete genomeriboflavin biosynthesis protein RibD4e-36152
NC_002950:155873:177951177951178943993Porphyromonas gingivalis W83, complete genomeriboflavin biosynthesis protein RibD6e-36151
NC_010729:265791:287800287800288792993Porphyromonas gingivalis ATCC 33277, complete genomeputative riboflavin biosynthesis protein2e-35150
NC_010610:908452:9102409102409112981059Lactobacillus fermentum IFO 3956, complete genomeriboflavin biosynthesis protein8e-32137
NC_004061:498483:508202508202508645444Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeriboflavin biosynthesis protein RibD1e-27124
NC_019673:2051363:207443620744362075350915Saccharothrix espanaensis DSM 44229 complete genomeriboflavin biosynthesis protein1e-26120
NC_015311:365007:3746013746013757431143Prevotella denticola F0289 chromosome, complete genomeriboflavin biosynthesis protein RibD5e-26118
NC_017187:1923733:1928387192838719293911005Arcobacter butzleri ED-1, complete genomeriboflavin biosynthesis protein RibD1e-25117
NC_005090:1921154:1920123192012319211571035Wolinella succinogenes DSM 1740, complete genomePUTATIVE RIBOFLAVIN-SPECIFIC DEAMINASE EC 3.5.4.2e-25117
NC_016785:1270295:1285998128599812870021005Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase3e-25116
NC_016782:1293452:1304412130441213054161005Corynebacterium diphtheriae 241 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase3e-25116
NC_002935:1315019:1330722133072213317261005Corynebacterium diphtheriae NCTC 13129, complete genomePutative riboflavin biosynthesis protein3e-25116
NC_016801:1333860:1349542134954213507321191Corynebacterium diphtheriae C7 (beta) chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase3e-25116
NC_016786:1293421:1304381130438113053851005Corynebacterium diphtheriae HC01 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase3e-25116
NC_016787:1276983:1293831129383112948351005Corynebacterium diphtheriae HC03 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase3e-25116
NC_016790:1259356:1271210127121012722141005Corynebacterium diphtheriae VA01 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase3e-25116
NC_016802:1256287:1305311130531113063151005Corynebacterium diphtheriae HC02 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase3e-25116
NC_016799:1343020:1359867135986713608711005Corynebacterium diphtheriae 31A chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase3e-25116
NC_016800:1317276:1332979133297913339831005Corynebacterium diphtheriae BH8 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase2e-25116
NC_016783:1313008:1328711132871113297151005Corynebacterium diphtheriae INCA 402 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase6e-25115
NC_016788:1286974:1303822130382213048261005Corynebacterium diphtheriae HC04 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase6e-25115
NC_016789:1334514:1350218135021813512221005Corynebacterium diphtheriae PW8 chromosome, complete genomediaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase6e-25115
NC_015957:10505870:105256421052564210526535894Streptomyces violaceusniger Tu 4113 chromosome, complete genomeriboflavin biosynthesis protein RibD5e-25115
NC_014643:1986440:2010623201062320118701248Rothia dentocariosa ATCC 17931 chromosome, complete genomeriboflavin biosynthesis protein RibD4e-25115
NC_017259:480656:485873485873486316444Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,riboflavin deaminase3e-25115
NC_011999:1567818:1574089157408915751141026Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein1e-24114
NC_002528:505951:506978506978507403426Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeriboflavin deaminase1e-24114
NC_014215:2295500:2314618231461823158381221Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Riboflavin-specific deaminase (diaminohydroxyphosphoribosylaminopyrimidine deaminase) (5-amino-6-(5-phosphoribosylamino)uracil reductase)6e-24112
NC_013410:3358008:3373968337396833752331266Fibrobacter succinogenes subsp. succinogenes S85 chromosome,riboflavin biosynthesis protein RibD6e-24112
NC_014166:455378:4693984693984704051008Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeriboflavin biosynthesis protein RibD4e-22105
NC_009663:2023941:204177220417722042764993Sulfurovum sp. NBC37-1, complete genomeriboflavin biosynthesis protein RibG5e-2099
NC_004459:2443000:245947824594782459903426Vibrio vulnificus CMCP6 chromosome I, complete sequenceProbable riboflavin biosynthesis protein RibD1e-1997.8
NC_014497:1:1078410784118241041Candidatus Zinderia insecticola CARI chromosome, complete genomeriboflavin biosynthesis protein RibD2e-1997.1
NC_012039:185607:201140201140202132993Campylobacter lari RM2100, complete genomeriboflavin biosynthesis protein3e-1996.7
NC_014391:4644500:465739446573944658281888Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeriboflavin biosynthesis protein RibD1e-1894.4
NC_014840:205723:225473225473225907435Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceDiaminohydroxyphosphoribosylaminopyrimidine deaminase8e-1788.2
NC_013156:573037:594288594288594947660Methanocaldococcus fervens AG86, complete genome2, 5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase1e-1480.9
NC_008942:915871:934754934754935431678Methanocorpusculum labreanum Z, complete genomehypothetical protein3e-1066.6