Pre_GI: BLASTP Hits

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Query: AP010958:2272919:2284813 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Start: 2284813, End: 2284938, Length: 126

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:2272919:228481322848132284938126Escherichia coli O103:H2 str. 12009, complete genome4e-1580.1
NC_013941:1014386:102451210245121025393882Escherichia coli O55:H7 str. CB9615 chromosome, complete genomenon-LEE-encoded type III effector H3e-0960.5
NC_013008:918215:932440932440933321882Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector3e-0960.5
NC_011353:921500:930847930847931728882Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenon-LEE-encoded effector NleH3e-0960.5
NC_002655:919654:929133929133930014882Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933K3e-0960.5
NC_002695:917509:927482927482928363882Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-0960.5
NC_011601:756885:767656767656768537882Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector NleH-like protein5e-0960.1
NC_013364:863209:882149882149883030882Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleH5e-0959.7
AP010958:867869:876081876081876962882Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleH-homolog5e-0959.7
NC_013353:867869:876081876081876962882Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleH5e-0959.7
NC_002655:2264773:228157322815732282484912Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-0958.9
NC_002695:1794635:180469318046931805604912Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-0958.9
NC_011353:1716037:172628417262841727195912Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenon-LEE-encoded effector NleH9e-0958.9
NC_011601:1466496:147672414767241477635912Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector NleH-like protein9e-0958.9
NC_013008:1715831:172525917252591726170912Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector9e-0958.9
NC_013361:1754346:176626017662601767171912Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector NleH9e-0958.9
NC_013364:1997891:200969620096962010607912Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleH-like protein9e-0958.9
NC_013941:1613595:162381316238131624724912Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNon-LEE-encoded type III effector H9e-0958.9
NC_013716:5141269:515254951525495153430882Citrobacter rodentium ICC168, complete genomeT3SS effector protein NleH5e-0856.6