Pre_GI: OUP Neighbours

Some Help

Query: NC_016848:950353 Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete

D: 36.963

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Akorabo, Ghana in 1980. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.

Number of Neighbours: 82




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015714:1*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome76.6942 %Subject ←→ Query32.2258
NC_015714:238891*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome75.5974 %Subject ←→ Query33.229
NC_016842:1*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete79.5895 %Subject ←→ Query33.6701
NC_010741:949732*Treponema pallidum subsp. pallidum SS14, complete genome92.2059 %Subject ←→ Query33.6941
NC_016842:748419*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete77.1201 %Subject ←→ Query33.7123
NC_016843:1*Treponema pallidum subsp. pertenue str. Gauthier chromosome,79.6201 %Subject ←→ Query33.7521
NC_000919:107373*Treponema pallidum subsp. pallidum str. Nichols, complete genome82.0741 %Subject ←→ Query33.8461
NC_010741:107370*Treponema pallidum subsp. pallidum SS14, complete genome82.0741 %Subject ←→ Query33.9494
NC_017268:1*Treponema pallidum subsp. pallidum str. Chicago chromosome,79.4914 %Subject ←→ Query34.0577
NC_021508:107384*Treponema pallidum subsp. pallidum SS14, complete genome82.0496 %Subject ←→ Query34.2656
NC_015714:943178*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome97.4877 %Subject ←→ Query34.2929
NC_010741:775000*Treponema pallidum subsp. pallidum SS14, complete genome78.3578 %Subject ←→ Query34.3142
NC_017268:949543*Treponema pallidum subsp. pallidum str. Chicago chromosome,92.0435 %Subject ←→ Query34.6634
NC_021508:949769*Treponema pallidum subsp. pallidum SS14, complete genome92.2212 %Subject ←→ Query34.8452
NC_016844:107382*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete82.0466 %Subject ←→ Query34.9891
NC_017268:107387*Treponema pallidum subsp. pallidum str. Chicago chromosome,82.0466 %Subject ←→ Query35.0316
NC_000919:948287*Treponema pallidum subsp. pallidum str. Nichols, complete genome92.2672 %Subject ←→ Query35.037
NC_016842:949899*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete99.9816 %Subject ←→ Query35.1975
NC_000919:746875Treponema pallidum subsp. pallidum str. Nichols, complete genome77.0251 %Subject ←→ Query35.1998
NC_016843:775371*Treponema pallidum subsp. pertenue str. Gauthier chromosome,78.3027 %Subject ←→ Query35.3265
NC_016848:775822*Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete78.1434 %Subject ←→ Query35.369
NC_015714:768500*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome78.5447 %Subject ←→ Query35.483
NC_016844:950231*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete92.0435 %Subject ←→ Query35.5106
NC_017268:775000*Treponema pallidum subsp. pallidum str. Chicago chromosome,78.2261 %Subject ←→ Query35.5446
NC_016843:950000*Treponema pallidum subsp. pertenue str. Gauthier chromosome,99.9112 %Subject ←→ Query35.6176
NC_016844:775334*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete78.5723 %Subject ←→ Query35.8628
NC_021508:775264*Treponema pallidum subsp. pallidum SS14, complete genome78.2108 %Subject ←→ Query36.5637
NC_015714:741044*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome76.7647 %Subject ←→ Query36.7394
NC_000919:773784Treponema pallidum subsp. pallidum str. Nichols, complete genome78.2414 %Subject ←→ Query36.964
NC_021508:12543*Treponema pallidum subsp. pallidum SS14, complete genome79.1881 %Subject ←→ Query36.9954
NC_016844:12545*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete79.1789 %Subject ←→ Query37.0075
NC_010741:745357Treponema pallidum subsp. pallidum SS14, complete genome77.7083 %Subject ←→ Query37.2477
NC_000919:12545*Treponema pallidum subsp. pallidum str. Nichols, complete genome79.2096 %Subject ←→ Query37.2678
NC_010741:12542*Treponema pallidum subsp. pallidum SS14, complete genome79.2279 %Subject ←→ Query37.3966
NC_016848:12548*Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete79.1085 %Subject ←→ Query37.5766
NC_017268:747429*Treponema pallidum subsp. pallidum str. Chicago chromosome,76.5901 %Subject ←→ Query40.7332
NC_021508:745388*Treponema pallidum subsp. pallidum SS14, complete genome77.7451 %Subject ←→ Query41.5767
NC_016848:748873Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete77.0833 %Subject ←→ Query41.8665
NC_016844:748117*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete77.5031 %Subject ←→ Query41.8991
NC_016842:775368*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete78.4957 %Subject ←→ Query42.0015
NC_016843:747950*Treponema pallidum subsp. pertenue str. Gauthier chromosome,77.2641 %Subject ←→ Query42.0177