Pre_GI: OUP Neighbours

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Query: NC_010999:880878 Lactobacillus casei, complete genome

D: 40.5776

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus casei BL23 is a probiotic strain that was originally isolated from cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

Number of Neighbours: 16




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_007520:2391675Thiomicrospira crunogena XCL-2, complete genome75.3799 %Subject Query26.1369
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome77.1477 %Subject Query28.9383
NC_015428:2291430*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.0705 %Subject Query30.5599
NC_007520:1940120*Thiomicrospira crunogena XCL-2, complete genome75.0766 %Subject ←→ Query31.019
NC_007520:2128178*Thiomicrospira crunogena XCL-2, complete genome75.8333 %Subject ←→ Query31.6498
NC_014334:589526Lactobacillus casei str. Zhang chromosome, complete genome75.9191 %Subject ←→ Query32.7578
NC_013198:1921500*Lactobacillus rhamnosus GG, complete genome78.7837 %Subject ←→ Query33.277
NC_013198:298000*Lactobacillus rhamnosus GG, complete genome78.7408 %Subject ←→ Query33.8795
NC_013199:282901*Lactobacillus rhamnosus Lc 705, complete genome78.5018 %Subject ←→ Query34.5452
NC_013199:1886271*Lactobacillus rhamnosus Lc 705, complete genome80.0245 %Subject ←→ Query35.0179
NC_010554:2646806Proteus mirabilis HI4320, complete genome75.5024 %Subject ←→ Query35.3988
NC_008526:817628*Lactobacillus casei ATCC 334, complete genome92.5797 %Subject ←→ Query36.4528
NC_013199:2536705*Lactobacillus rhamnosus Lc 705, complete genome77.7451 %Subject ←→ Query37.5527
NC_013198:813830*Lactobacillus rhamnosus GG, complete genome83.4099 %Subject ←→ Query37.9547
NC_015428:700479*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome76.3817 %Subject ←→ Query38.8838
NC_013199:811929*Lactobacillus rhamnosus Lc 705, complete genome83.9369 %Subject ←→ Query39.2072