Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:1632150 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16311881632153966sugar kinaseQuickGO ontologyBLASTP
163215016331541005glycohydrolaseQuickGO ontologyBLASTP
163467716357291053fructose-bisphosphate aldolaseQuickGO ontologyBLASTP
16357821636681900lipid kinaseQuickGO ontologyBLASTP
16372251637578354hypothetical proteinBLASTP
16377001638116417hypothetical proteinBLASTP
16380751638266192hypothetical proteinBLASTP
163875716401211365proteaseQuickGO ontologyBLASTP
16402821640899618hypothetical proteinBLASTP
16409571641121165hypothetical proteinBLASTP
16415561641975420hypothetical proteinBLASTP
16422891642429141hypothetical protein
16425221642962441hypothetical proteinBLASTP
16435641644097534hypothetical proteinBLASTP
16441251644862738hypothetical proteinBLASTP
16449641645329366hypothetical proteinBLASTP
16457411645974234RhsEQuickGO ontologyBLASTP
16461831647049867hypothetical proteinBLASTP
16480571648434378hypothetical proteinBLASTP
16490101649126117hypothetical proteinBLASTP
16493381649472135hypothetical proteinBLASTP
16495761650319744hypothetical proteinBLASTP
16504501651169720hypothetical proteinBLASTP
165117416532852112hypothetical proteinBLASTP
16532961654012717hypothetical proteinBLASTP
165401216552141203cytoplasmic proteinQuickGO ontologyBLASTP
16554831656205723DNA-binding transcriptional regulator BaeRQuickGO ontologyBLASTP
165620216576051404signal transduction histidine-protein kinase BaeSQuickGO ontologyBLASTP
165901316620933081multidrug efflux system subunit MdtCQuickGO ontologyBLASTP
166209416652163123multidrug efflux system subunit MdtBQuickGO ontologyBLASTP
166521616664571242multidrug efflux system subunit MdtAQuickGO ontologyBLASTP