Pre_GI Gene

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Host: NC_011769 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011769:2016000 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20163132016570258phage proteinQuickGO ontologyBLASTP
20165542016892339transcriptional regulator XRE familyQuickGO ontologyBLASTP
20169442017444501hypothetical proteinBLASTP
20174482017771324hypothetical proteinBLASTP
20177742018379606hypothetical proteinBLASTP
201837920211352757Phage-related protein tail component-like proteinQuickGO ontologyBLASTP
20211742021533360hypothetical proteinBLASTP
20216132022518906hypothetical proteinBLASTP
20225212022874354hypothetical proteinBLASTP
202287720256932817phage tape measure proteinQuickGO ontologyBLASTP
20257992026587789hypothetical protein
20268392027723885prophage antirepressorQuickGO ontologyBLASTP
20279732028872900phage proteinQuickGO ontologyBLASTP
2029036202912893
20291522029499348hypothetical proteinBLASTP
20295102029929420hypothetical proteinBLASTP
20299452030313369hypothetical proteinBLASTP
20303002030698399hypothetical proteinBLASTP
20306982031012315phage head-tail adaptorQuickGO ontologyBLASTP
20310152031599585phage conserved hypothetical protein phiE125 gp8QuickGO ontologyBLASTP
20315962031775180hypothetical protein
203182120330411221phage major capsid protein HK97 familyQuickGO ontologyBLASTP
20330542033755702phage prohead protease HK97 familyQuickGO ontologyBLASTP
203374220349681227phage portal protein HK97 familyQuickGO ontologyBLASTP
203496820366651698TerminaseQuickGO ontologyBLASTP
20366582037131474putative phage terminase small subunit P27 familyQuickGO ontologyBLASTP
20372042037599396HNH endonucleaseQuickGO ontologyBLASTP
20381252038472348hypothetical protein
20384542038684231hypothetical protein
20386562039039384hypothetical protein
20390422039449408hypothetical proteinBLASTP
20396052039844240BLASTP
203986220408811020acyltransferase 3QuickGO ontologyBLASTP
20411992041420222hypothetical proteinBLASTP
20415422041820279plasmid maintenance system killerQuickGO ontologyBLASTP
20418312042136306plasmid maintenance system antidote protein XRE familyQuickGO ontologyBLASTP
20421452042438294hypothetical proteinBLASTP
20426092043241633hypothetical protein
20432382044095858hypothetical proteinBLASTP
20452402045662423hypothetical proteinBLASTP
20457222045961240hypothetical protein
20461952046419225hypothetical protein
20465292046957429hypothetical protein
20469892047396408hypothetical protein
20477802048514735putative phage repressorQuickGO ontologyBLASTP