Pre_GI: BLASTP Hits

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Query: NC_011769:2016000:2026839 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2026839, End: 2027723, Length: 885

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016513:1400899:140953014095301410186657Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeprophage antirepressor5e-28125
NC_011751:643976:657806657806658414609Escherichia coli UMN026 chromosome, complete genomehypothetical protein6e-26118
NC_016002:2037374:205784720578472058479633Pseudogulbenkiania sp. NH8B, complete genomeBRO family, N- domain containing protein4e-24112
NC_010577:1188438:121402512140251214657633Xylella fastidiosa M23, complete genomeProphage antirepressor-like protein2e-21103
NC_004556:1178897:120448512044851205117633Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-21103
NC_010404:55908:725687256873266699Acinetobacter baumannii plasmid p3ABAYE, complete sequenceputative phage-related protein2e-1996.3
NC_009800:320115:327153327153327779627Escherichia coli HS, complete genomehypothetical protein8e-1891.3
NC_012559:1685812:169265216926521693161510Laribacter hongkongensis HLHK9, complete genomeBRO family, N-domain protein1e-1790.5
CU928145:2655989:267229926722992673009711Escherichia coli 55989 chromosome, complete genomehypothetical protein from phage4e-1789
NC_011748:2655989:267229926722992673009711Escherichia coli 55989, complete genomehypothetical protein from phage4e-1789
NC_010554:539122:545287545287546078792Proteus mirabilis HI4320, complete genomephage protein1e-1274.3
NC_013315:1679000:167955516795551680328774Clostridium difficile CD196 chromosome, complete genomehypothetical protein1e-0963.9
NC_002946:1020175:104444710444471045292846Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein9e-0961.2
NC_010554:539122:557917557917558750834Proteus mirabilis HI4320, complete genomephage antirepressor protein2e-0756.6
NC_011035:541560:560415560415561260846Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein3e-0755.8
NC_017179:1683199:168852816885281689337810Clostridium difficile BI1, complete genomehypothetical protein3e-0755.8
NC_010577:1188438:121324012132401214028789Xylella fastidiosa M23, complete genomeprophage antirepressor1e-0653.9
NC_004556:1178897:120370012037001204488789Xylella fastidiosa Temecula1, complete genomehypothetical protein1e-0653.9