Some Help

Query: NC_011769:2016000:2039042 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2039042, End: 2039449, Length: 408

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002937:1764117:180025918002591800675417Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein4e-51199
NC_002937:1578213:158147915814791581886408Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein2e-50197
NC_012962:4942000:495029849502984950693396Photorhabdus asymbiotica, complete genomesimilarities with phage structural protein p56e-28122
NC_007626:418067:423624423624424067444Magnetospirillum magneticum AMB-1, complete genomehypothetical protein1e-26118
NC_014228:3022903:304154130415413041936396Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-26118
NC_014931:2929695:2949697294969729525102814Variovorax paradoxus EPS chromosome, complete genomephage-like protein9e-24108
NC_014931:2949697:2949697294969729525102814Variovorax paradoxus EPS chromosome, complete genomephage-like protein9e-24108
NC_013892:671000:690482690482690883402Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-23105
NC_013892:2005480:200881320088132009214402Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-22103
NC_011601:2806392:2824180282418028266902511Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein7e-22102
NC_007712:1997010:1997010199701019995412532Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-1994
NC_004129:4333302:434183843418384342413576Pseudomonas fluorescens Pf-5, complete genomestructural protein P5, putative1e-1684.7
NC_011741:2715246:2733928273392827359342007Escherichia coli IAI1 chromosome, complete genomehypothetical protein4e-1270.1
CU928160:2715246:2733928273392827359342007Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein from bacteriophage origin4e-1270.1
NC_009436:1141376:1143916114391611457361821Enterobacter sp. 638, complete genomehypothetical protein2e-0858.2