Pre_GI: BLASTP Hits

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Query: NC_011769:2016000:2039605 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2039605, End: 2039844, Length: 240

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010511:7024412:704739270473927048213822Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit4e-1683.6
NC_002937:2068117:211183521118352112677843Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeISDvu2, transposase OrfB4e-1683.6
NC_002937:2263763:227799322779932278835843Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeISDvu2, transposase OrfB4e-1683.6
NC_020409:1589044:160207416020741602451378Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completetransposase (fragment)9e-1579
NC_008740:3520500:352394035239403524755816Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region1e-1478.2
NC_015593:1587684:159353615935361594381846Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeIntegrase catalytic protein1e-1271.6
AC_000091:3180275:318516631851663186071906Escherichia coli W3110 DNA, complete genomeIS2 insertion element transposase InsAB'2e-1271.2
AC_000091:4501430:450327545032754504180906Escherichia coli W3110 DNA, complete genomeIS2 insertion element transposase InsAB'2e-1271.2
NC_008258:3550500:356562635656263566465840Shigella flexneri 5 str. 8401, complete genomeIS2 ORF22e-1271.2
NC_013008:1513000:152726215272621528167906Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeinsertion element IS2 transposase InsD2e-1271.2
NC_011353:1513000:152697415269741527879906Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeinsertion element IS2 transposase InsD2e-1271.2
NC_010473:3273882:328227732822773283182906Escherichia coli str. K-12 substr. DH10B, complete genomeIS2 insertion element transposase InsAB'2e-1271.2
NC_010473:3069529:308826430882643089169906Escherichia coli str. K-12 substr. DH10B, complete genomeIS2 insertion element transposase InsAB'2e-1271.2
NC_010473:4596500:459842645984264599331906Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; IS2 insertion element transposase InsAB'2e-1271.2
NC_010658:1933605:195212319521231953028906Shigella boydii CDC 3083-94, complete genomeIS2 transposase orfB2e-1271.2
NC_010658:1772994:178351617835161784421906Shigella boydii CDC 3083-94, complete genomeIS2 transposase orfB2e-1271.2
NC_010658:3622610:362809536280953629000906Shigella boydii CDC 3083-94, complete genomeIS2 transposase orfB2e-1271.2
NC_000913:3176000:318453231845323185437906Escherichia coli K12, complete genomeIS2 insertion element transposase InsAB'2e-1271.2
NC_010658:1593137:161025016102501611155906Shigella boydii CDC 3083-94, complete genomeIS2 transposase orfB2e-1271.2
NC_010658:1933605:194004019400401940945906Shigella boydii CDC 3083-94, complete genomeIS2 transposase orfB2e-1271.2
NC_002655:1655944:167002216700221670927906Escherichia coli O157:H7 EDL933, complete genomeinsertion sequence 2 OrfB protein2e-1271.2
NC_004337:3590323:383044938304493831354906Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfB protein2e-1271.2
NC_004337:2747917:276968827696882770593906Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfB protein2e-1271.2
NC_010498:1659328:166298716629871663892906Escherichia coli SMS-3-5, complete genomeIS2 transposase orfB2e-1271.2
NC_004337:3590323:381455638145563815461906Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfB protein2e-1271.2
NC_010498:1094000:110231311023131103218906Escherichia coli SMS-3-5, complete genomeIS2 transposase orfB2e-1271.2
NC_007606:1209132:121711612171161217928813Shigella dysenteriae Sd197, complete genomeIS2 ORF22e-1271.2
NC_010498:1210145:121252212125221213427906Escherichia coli SMS-3-5, complete genomeIS2 transposase orfB2e-1271.2
NC_004741:4160500:416794941679494168833885Shigella flexneri 2a str. 2457T, complete genomeinsertion sequence 2 OrfB protein2e-1271.2
NC_010660:33109:455234552346428906Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS2 transposase orfB2e-1271.2
AC_000091:1083798:110563311056331106556924Escherichia coli W3110 DNA, complete genomeIS2 element protein2e-1271.2
NC_002695:1571389:158604615860461586951906Escherichia coli O157:H7 str. Sakai, complete genomeinsertion sequence 2 OrfB protein2e-1271.2
NC_010658:1193225:120694412069441207849906Shigella boydii CDC 3083-94, complete genomeIS2 transposase orfB2e-1271.2
NC_004337:2035945:203508220350822035987906Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfB protein2e-1271.2
NC_007384:2933625:293907029390702939909840Shigella sonnei Ss046, complete genomeIS2 ORF22e-1271.2
NC_008258:2542863:255561825556182556457840Shigella flexneri 5 str. 8401, complete genomeIS2 ORF22e-1271.2
NC_008258:3224721:324507832450783245917840Shigella flexneri 5 str. 8401, complete genomeIS2 ORF22e-1271.2
NC_007384:3151344:316636031663603167199840Shigella sonnei Ss046, complete genomeIS2 ORF22e-1271.2
NC_004741:2009769:201175520117552012639885Shigella flexneri 2a str. 2457T, complete genomeinsertion sequence 2 OrfB protein2e-1271.2
NC_007384:2007467:201113220111322011971840Shigella sonnei Ss046, complete genomeIS2 ORF22e-1271.2
NC_007384:1086025:108909310890931089932840Shigella sonnei Ss046, complete genomeIS2 ORF22e-1271.2
NC_007384:1320287:134143613414361342275840Shigella sonnei Ss046, complete genomeIS2 ORF22e-1271.2
NC_007384:1737885:175038617503861751225840Shigella sonnei Ss046, complete genomeIS2 ORF22e-1271.2
NC_013364:2672837:269467026946702695575906Escherichia coli O111:H- str. 11128, complete genomeputative IS2 transposase InsAB'2e-1271.2
NC_017328:2090679:209067920906792091584906Shigella flexneri 2002017 chromosome, complete genomeIS2 orfB2e-1271.2
NC_009837:127000:127480127480128385906Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceInsD2e-1271.2
NC_016822:3065426:307037430703743071279906Shigella sonnei 53G, complete genomeIS2 transposase TnpB2e-1271.2
NC_009837:92000:106687106687107592906Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceInsD2e-1271.2
NC_009790:42112:421124211243023912Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS2, transposase orfB2e-1271.2
NC_009788:16360:291632916330068906Escherichia coli E24377A plasmid pETEC_73, complete sequenceIS2, transposase orfB2e-1271.2
NC_000913:4494773:449661844966184497523906Escherichia coli K12, complete genomeKpLE2 phage-like element; IS2 insertion element transposase InsAB'2e-1271.2
NC_000913:2975659:299439429943942995299906Escherichia coli K12, complete genomeIS2 insertion element transposase InsAB'2e-1271.2
AC_000091:2976293:299502829950282995933906Escherichia coli W3110 DNA, complete genomeIS2 insertion element transposase InsAB'2e-1271.2
NC_012759:2862807:288154228815422882447906Escherichia coli BW2952 chromosome, complete genomeinsertion element IS2 transposase InsD2e-1271.2
NC_012759:3063285:307168030716803072585906Escherichia coli BW2952 chromosome, complete genomeinsertion element IS2 transposase InsD2e-1271.2
NC_012759:4433500:443535344353534436258906Escherichia coli BW2952 chromosome, complete genomeinsertion element IS2 transposase InsD2e-1271.2
NC_016822:1304398:132498813249881325893906Shigella sonnei 53G, complete genomeIS2 transposase TnpB2e-1271.2
NC_016822:1431200:145330614533061454211906Shigella sonnei 53G, complete genomeIS2 transposase TnpB2e-1271.2
NC_016822:1431200:146993814699381470843906Shigella sonnei 53G, complete genomeIS2 transposase TnpB2e-1271.2
NC_016822:3946500:395454539545453955450906Shigella sonnei 53G, complete genomeIS2 transposase TnpB2e-1271.2
NC_017319:192482:218632218632219537906Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceinsertion element IS2 transposase InsD2e-1271.2
NC_008258:1934479:195544719554471956286840Shigella flexneri 5 str. 8401, complete genomeIS2 ORF22e-1271.2
NC_016822:3282654:330018633001863301091906Shigella sonnei 53G, complete genomeIS2 transposase TnpB2e-1270.9
NC_004431:3409389:345136634513663452271906Escherichia coli CFT073, complete genomeinsertion sequence 2 OrfB protein2e-1270.9
NC_011751:3453683:347301734730173473922906Escherichia coli UMN026 chromosome, complete genomeinsertion element IS2 transposase InsD2e-1270.9
NC_007384:1696831:169860716986071699227621Shigella sonnei Ss046, complete genomeIS2 ORF23e-1270.5
NC_017319:155958:172569172569173420852Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS2 ORF23e-1270.5
NC_010473:1712984:173853017385301739186657Escherichia coli str. K-12 substr. DH10B, complete genome3e-1270.5
AC_000091:1627049:165259516525951653251657Escherichia coli W3110 DNA, complete genomepredicted transposase3e-1270.5
NC_000913:1625500:164890516489051649561657Escherichia coli K12, complete genomeQin prophage; IS2 insertion element transposase InsAB', C-ter fragment (pseudogene)3e-1270.5
NC_004337:3049118:308005630800563080844789Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfB protein3e-1270.5
NC_004851:157675:170327170327171064738Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS2 ORF24e-1270.1
NC_015381:1318818:133301213330121333755744Burkholderia gladioli BSR3 chromosome 1, complete sequencetransposase4e-1270.1
NC_010515:2111691:212738121273812128217837Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region4e-1270.1
NC_010515:2691000:270790727079072708743837Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region4e-1270.1
NC_010515:2111691:217244221724422173278837Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region4e-1270.1
NC_010498:3291344:329830332983033298827525Escherichia coli SMS-3-5, complete genome4e-1270.1
NC_007651:2166000:217422821742282175121894Burkholderia thailandensis E264 chromosome I, complete sequencetransposase6e-1269.7
NC_008061:2106848:212259221225922123323732Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region5e-1269.7
NC_008543:127675:146447146447147178732Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region5e-1269.7
NC_014118:1528851:153941315394131540306894Burkholderia sp. CCGE1002 chromosome chromosome 2, completeIntegrase catalytic region6e-1269.3
NC_014117:132524:164228164228165121894Burkholderia sp. CCGE1002 chromosome chromosome 1, completeIntegrase catalytic region6e-1269.3
NC_013364:3701895:375242037524203753244825Escherichia coli O111:H- str. 11128, complete genomeputative IS2 transposase InsAB7e-1269.3
NC_004741:3041294:307080030708003071684885Shigella flexneri 2a str. 2457T, complete genomeinsertion sequence 2 OrfB protein9e-1268.9
NC_017328:3088907:311971431197143120553840Shigella flexneri 2002017 chromosome, complete genomeIS2 orfB9e-1268.9
NC_004337:3590323:391512539151253916030906Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfB protein1e-1168.9
NC_016002:1048420:105411010541101054949840Pseudogulbenkiania sp. NH8B, complete genomeintegrase catalytic subunit1e-1168.6
NC_007384:3741708:375380637538063754645840Shigella sonnei Ss046, complete genomeIS2 ORF21e-1168.6
NC_012721:1635999:164348016434801644322843Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase1e-1168.6
NC_012724:2547500:257358325735832574425843Burkholderia glumae BGR1 chromosome 1, complete genomeTransposase1e-1168.6
NC_010508:1980689:199196819919681992813846Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceIntegrase catalytic region1e-1168.2
NC_007613:4119771:413300241330024133841840Shigella boydii Sb227, complete genomeIS2 ORF22e-1168.2
NC_007613:1353500:135942213594221360261840Shigella boydii Sb227, complete genomeIS2 ORF22e-1168.2
NC_015136:1101725:112641911264191127261843Burkholderia sp. CCGE1001 chromosome 1, complete sequenceintegrase catalytic subunit2e-1167.8
NC_007973:2773427:278000127800012780837837Ralstonia metallidurans CH34 chromosome 1, complete sequenceIntegrase, catalytic region2e-1167.8
NC_007973:2150962:216482121648212165657837Ralstonia metallidurans CH34 chromosome 1, complete sequenceIntegrase, catalytic region2e-1167.8
NC_003305:1743939:174795317479531748780828Agrobacterium tumefaciens str. C58 chromosome linear, completeIS426 transposase2e-1167.8
NC_003063:304962:325978325978326805828Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-1167.8
NC_004337:3590323:360514936051493606054906Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfB protein2e-1167.8
NC_011002:703194:716687716687717574888Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative transposase4e-1166.6
NC_014307:1131241:114198811419881142836849Ralstonia solanacearum CFBP2957 chromosome, complete genomeis2 insertion element transposase insab'; cp4-44 prophage6e-1166.2
NC_003296:556836:577528577528578130603Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO10-TRANSPOSASE ORFB PROTEIN6e-1166.2
NC_003295:2507850:253046725304672531354888Ralstonia solanacearum GMI1000, complete genomeISRSO10-TRANSPOSASE ORFB PROTEIN5e-1166.2
NC_016626:1699500:171292817129281713770843Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase5e-1166.2
NC_015740:3486226:349605834960583496885828Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase for insertion element7e-1165.9
NC_020209:1949500:196701019670101967750741Pseudomonas poae RE*1-1-14, complete genomeputative transposase for insertion element1e-1065.5
NC_020209:4943734:496710049671004967840741Pseudomonas poae RE*1-1-14, complete genomeputative transposase for insertion element1e-1065.5
NC_020209:4943734:496401149640114964751741Pseudomonas poae RE*1-1-14, complete genomeputative transposase for insertion element1e-1065.5
NC_014310:279912:286409286409287296888Ralstonia solanacearum PSI07 megaplasmid, complete sequencetransposase1e-1065.1
NC_003296:673790:708327708327709175849Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO10-TRANSPOSASE ORFB PROTEIN1e-1065.1
NC_014311:1635408:165338416533841654169786Ralstonia solanacearum PSI07 chromosome, complete genometransposase1e-1065.1
NC_011002:703194:711610711610712497888Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative transposase1e-1065.1
NC_007650:84140:106194106194107081888Burkholderia thailandensis E264 chromosome II, complete sequencetransposase1e-1065.1
NC_007651:1726472:173757817375781738465888Burkholderia thailandensis E264 chromosome I, complete sequencetransposase1e-1065.1
NC_007651:1620000:164785916478591648746888Burkholderia thailandensis E264 chromosome I, complete sequencetransposase1e-1065.1
NC_014311:3076519:310897231089723109820849Ralstonia solanacearum PSI07 chromosome, complete genometransposase1e-1065.1
NC_014311:2606434:261173426117342612582849Ralstonia solanacearum PSI07 chromosome, complete genometransposase1e-1065.1
NC_014311:1545175:155859315585931559441849Ralstonia solanacearum PSI07 chromosome, complete genometransposase (ORF 2, IS2 )1e-1065.1
NC_007650:420745:439734439734440621888Burkholderia thailandensis E264 chromosome II, complete sequencetransposase1e-1065.1
NC_007651:3064530:315514531551453156032888Burkholderia thailandensis E264 chromosome I, complete sequencetransposase1e-1065.1
NC_008253:4817864:482493248249324825411480Escherichia coli 536, complete genomehypothetical protein2e-1064.7
NC_007946:4875997:488443448844344884913480Escherichia coli UTI89, complete genomehypothetical protein2e-1064.7
NC_015740:110633:118152118152118979828Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative transposase for insertion element6e-1062.8
NC_016812:258500:289436289436290266831Sinorhizobium fredii HH103, complete genome7e-1062.4
NC_009428:725871:750857750857751690834Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeintegrase catalytic subunit8e-1062.4
NC_014121:489500:513684513684514565882Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-0962
NC_003047:3360000:341101134110113411841831Sinorhizobium meliloti 1021, complete genomeTRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM13e-0960.5
NC_006625:63342:750007500075572573Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceIS2 ORF23e-0960.5
NC_013353:3853082:387245438724543872834381Escherichia coli O103:H2 str. 12009, complete genome4e-0960.5
AP010958:3853082:387245438724543872834381Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-0960.5
NC_010515:1205258:120863812086381209540903Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region4e-0960.5
NC_015424:2462522:247848324784832479361879Aeromonas veronii B565 chromosome, complete genomeinsertion element IS2 transposase InsD5e-0960.1
NC_014107:171170:191758191758192423666Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,IS2 transposase orfB5e-0959.7
NC_014121:4299500:431688943168894317560672Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase7e-0959.3
NC_014121:3553809:356179035617903562626837Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein8e-0958.9
NC_014121:1682638:171493117149311715767837Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase8e-0958.9
NC_014121:2330451:234248723424872343302816Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein8e-0958.9
NC_014121:2090630:209930220993022100138837Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein8e-0958.9
NC_014121:5000069:500117150011715002007837Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase8e-0958.9
NC_009649:94871:103459103459104340882Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,hypothetical protein2e-0858.2
NC_009649:94871:952249522496105882Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,putative transposase2e-0858.2
NC_016612:2009927:201626820162682016633366Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-0858.2
NC_011083:4547825:460419546041954605076882Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-0858.2
NC_016002:2037374:206907720690772069430354Pseudogulbenkiania sp. NH8B, complete genomeintegrase catalytic subunit1e-0858.2
NC_007650:832507:840112840112840819708Burkholderia thailandensis E264 chromosome II, complete sequencetransposase2e-0857.8
NC_014839:253961:3026573026573038461190Pantoea sp. At-9b plasmid pPAT9B02, complete sequence6e-0856.2
NC_002655:301940:309886309886310251366Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by IS22e-0754.3
NC_011353:305820:313766313766314131366Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeIS2 ORF22e-0754.3
NC_013008:306953:313765313765314130366Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-0754.3
NC_013446:2655955:266808526680852668948864Comamonas testosteroni CNB-2, complete genomeIntegrase, catalytic region6e-0752.8
NC_013446:2820000:284235228423522843215864Comamonas testosteroni CNB-2, complete genometransposase6e-0752.8
NC_013446:4511602:452719045271904528053864Comamonas testosteroni CNB-2, complete genometransposase6e-0752.8
NC_013446:4281250:428570042857004286563864Comamonas testosteroni CNB-2, complete genometransposase6e-0752.8
NC_006350:1938631:197963219796321980066435Burkholderia pseudomallei K96243 chromosome 1, complete sequence1e-0651.6
NC_015138:4205986:422296842229684223861894Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeintegrase catalytic region2e-0651.2