Pre_GI: BLASTN Hits

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Query: NC_017249:3229500 Bradyrhizobium japonicum USDA 6, complete genome

Start: 3229500, End: 3264838, Length: 35339

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome01756BLASTN svgBLASTP svg
NC_019973:60287956028795605165122857Mesorhizobium australicum WSM2073, complete genome0664BLASTN svgBLASTP svg
NC_015675:66518996651899667736225464Mesorhizobium opportunistum WSM2075 chromosome, complete genome0664BLASTN svgBLASTP svg
NC_010338:4481356*4481356450312821773Caulobacter sp. K31, complete genome2e-116428BLASTN svgBLASTP svg
NC_007643:185135*18513520908123947Rhodospirillum rubrum ATCC 11170, complete genome6e-107396BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome2e-85325BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete3e-53218BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome7e-48200BLASTN svgBLASTP svg
NC_004463:57224685722468574221819751Bradyrhizobium japonicum USDA 110, complete genome3e-44188BLASTN svgBLASTP svg
NC_014623:47402214740221476959929379Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3e-41178BLASTN svgBLASTP svg
NC_007722:85112985112987648525357Erythrobacter litoralis HTCC2594, complete genome3e-41178BLASTN svgBLASTP svg
NC_004463:76834267683426770287319448Bradyrhizobium japonicum USDA 110, complete genome4e-37165BLASTN svgBLASTP svg
NC_015376:20100092010009204069430686Burkholderia gladioli BSR3 chromosome chromosome 2, complete4e-34155BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome9e-32147BLASTN svgBLASTP svg
NC_015850:2259769*2259769228620926441Acidithiobacillus caldus SM-1 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome1e-27133BLASTN svgBLASTP svg
NC_013209:19253411925341195459929259Acetobacter pasteurianus IFO 3283-01, complete genome8e-26127BLASTN svgBLASTP svg
NC_008095:55277075527707555977932073Myxococcus xanthus DK 1622, complete genome3e-25125BLASTN svgBLASTP svg
NC_015711:74715007471500749740725908Myxococcus fulvus HW-1 chromosome, complete genome5e-24121BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence5e-24121BLASTN svgBLASTP svg
NC_020126:6344827*6344827637873333907Myxococcus stipitatus DSM 14675, complete genome2e-23119BLASTN svgBLASTP svg
NC_014623:58859035885903590954323641Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_008752:2334511*2334511236012625616Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-23119BLASTN svgBLASTP svg
NC_003902:62482862482864848923662Xanthomonas campestris pv. campestris str. ATCC 33913, complete8e-23117BLASTN svgBLASTP svg
NC_007086:62689162689165055223662Xanthomonas campestris pv. campestris str. 8004, complete genome8e-23117BLASTN svgBLASTP svg
NC_014830:3156873*3156873318066423792Intrasporangium calvum DSM 43043 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_010688:60501860501862846423447Xanthomonas campestris pv. campestris, complete genome3e-19105BLASTN svgBLASTP svg
NC_015947:22314932231493225840026908Burkholderia sp. JV3 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_004463:16830001683000171788734888Bradyrhizobium japonicum USDA 110, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_007712:532500*53250055659924100Sodalis glossinidius str. 'morsitans', complete genome3e-1695.6BLASTN svgBLASTP svg
NC_007958:2423335*2423335244565022316Rhodopseudomonas palustris BisB5, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007778:3784104*3784104381456530462Rhodopseudomonas palustris HaA2, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_015388:2143329*2143329217016326835Desulfobacca acetoxidans DSM 11109 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_007964:32882532882536913940315Nitrobacter hamburgensis X14, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014221:3175013*3175013320035525343Truepera radiovictrix DSM 17093 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014039:499233*49923352279623564Propionibacterium acnes SK137 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_006085:481231*48123150479923569Propionibacterium acnes KPA171202, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_004463:69241506924150696442440275Bradyrhizobium japonicum USDA 110, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007644:22055992205599223465329055Moorella thermoacetica ATCC 39073, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008700:36923333692333371504922717Shewanella amazonensis SB2B, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007777:25434752543475256518621712Frankia sp. CcI3, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007951:20458302045830206373317904Burkholderia xenovorans LB400 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_010172:3946644*3946644397036123718Methylobacterium extorquens PA1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011004:2507566*2507566253137523810Rhodopseudomonas palustris TIE-1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_016027:2047954*2047954211021762264Gluconacetobacter xylinus NBRC 3288, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013956:45500045500047503720038Pantoea ananatis LMG 20103 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010172:38946523894652393647541824Methylobacterium extorquens PA1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007516:1974500*1974500199561621117Synechococcus sp. CC9605, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013510:888542*88854291609927558Thermomonospora curvata DSM 43183, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015186:36502*365025988323382Acidiphilium multivorum AIU301, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010505:26576832657683268177424092Methylobacterium radiotolerans JCM 2831, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_011757:5693584*5693584571331619733Methylobacterium chloromethanicum CM4, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015731:3658956*3658956368280423849Nitrosomonas sp. Is79A3 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011894:983572983572101559932028Methylobacterium nodulans ORS 2060, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010506:51950005195000521688621887Shewanella woodyi ATCC 51908, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015856:43425004342500437154729048Collimonas fungivorans Ter331 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007494:71452571452574074926225Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence4e-0661.9BLASTN svgBLASTP svg