Pre_GI: BLASTP Hits

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Query: NC_017218:534699:553809 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 553809, End: 554498, Length: 690

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017218:867550:877725877725878435711Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome9e-21100
NC_011593:53044:539605396054178219Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,9e-2097.1
NC_014638:56500:709457094571196252Bifidobacterium bifidum PRL2010 chromosome, complete genomeIS3 family transposase1e-1996.3
NC_017219:51563:537515375154035285Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transposase2e-1995.9
NC_014638:56500:711937119371444252Bifidobacterium bifidum PRL2010 chromosome, complete genomeIS3 family transposase1e-1789.7
NC_014169:2234249:224918122491812249666486Bifidobacterium longum subsp. longum JDM301 chromosome, completetransposase-like protein4e-1788.2
NC_008618:1729739:1730912173091217321801269Bifidobacterium adolescentis ATCC 15703, complete genomeIS3 family transposase1e-1687
NC_009140:121107:1383811383811399251545Salmonella enterica enterica sv Newport str. SL254, completetransposase InsG for insertion sequence IS13535e-1478.2
NC_016860:4055117:4080318408031840818621545Salmonella enterica subsp. enterica serovar Typhimurium strInsG5e-1478.2
NC_016590:548312:558498558498558722225Burkholderia sp. YI23 chromosome 3, complete sequenceintegrase, catalytic region2e-1375.9
NC_013446:2820000:284026328402632841003741Comamonas testosteroni CNB-2, complete genomeIntegrase, catalytic region4e-1375.1
NC_007948:360199:3601993601993617461548Polaromonas sp. JS666, complete genomeIntegrase, catalytic region5e-1374.3
NC_017068:1480148:1489201148920114902561056Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative transposase7e-1374.3
NC_015383:229036:2359922359922370321041Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceintegrase, catalytic region1e-1273.2
NC_015381:2405446:2413309241330924148471539Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative transposase1e-1273.2
NC_013446:1648556:1684363168436316859011539Comamonas testosteroni CNB-2, complete genomeIntegrase, catalytic region2e-1272.8
NC_010002:2933909:2940968294096829425061539Delftia acidovorans SPH-1, complete genomeIntegrase catalytic region3e-1272
NC_007973:3240866:3247826324782632493641539Ralstonia metallidurans CH34 chromosome 1, complete sequenceIntegrase, catalytic region3e-1272
NC_015136:1101725:1107959110795911094971539Burkholderia sp. CCGE1001 chromosome 1, complete sequenceintegrase catalytic subunit3e-1272
NC_010087:319063:3568803568803584181539Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region5e-1271.2
NC_010087:460591:4653284653284668661539Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region5e-1271.2
NC_010515:1375091:1413849141384914153871539Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region5e-1271.2
NC_010801:550270:5667645667645679781215Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu11 transposase5e-1271.2
NC_010508:1206498:1215312121531212168501539Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceIntegrase catalytic region7e-1270.9
NC_015737:2691246:2764400276440027654461047Clostridium sp. SY8519, complete genomehypothetical protein1e-1170.1
NC_015737:2691246:2704589270458927056351047Clostridium sp. SY8519, complete genomehypothetical protein1e-1170.1
NC_015737:1441086:1446438144643814478201383Clostridium sp. SY8519, complete genomehypothetical protein1e-1170.1
NC_012724:2068588:208041220804122080738327Burkholderia glumae BGR1 chromosome 1, complete genome2e-1169.7
NC_015152:2528399:2546312254631225478741563Spirochaeta sp. Buddy chromosome, complete genome3e-1168.9
NC_008782:3167440:3218129321812932196671539Acidovorax sp. JS42, complete genomeIntegrase, catalytic region2e-1168.9
NC_015152:2549756:2551426255142625529911566Spirochaeta sp. Buddy chromosome, complete genome4e-1168.6
NC_009254:74000:8357483574851121539Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit4e-1168.2
NC_010627:233572:251059251059251634576Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceIntegrase catalytic region5e-1168.2
NC_015563:1951368:1986783198678319883211539Delftia sp. Cs1-4 chromosome, complete genomeintegrase catalytic subunit6e-1167.8
NC_008340:1733735:1742504174250417440211518Alkalilimnicola ehrlichei MLHE-1, complete genomeIntegrase, catalytic region8e-1167.4
NC_008340:1733735:1746503174650317480201518Alkalilimnicola ehrlichei MLHE-1, complete genomeIntegrase, catalytic region8e-1167.4
NC_014839:12519:1559215592171241533Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceIntegrase catalytic region2e-1065.9
NC_016633:2688144:2692249269224926938051557Sphaerochaeta pleomorpha str. Grapes chromosome, complete genometransposase3e-1065.5
NC_016633:2688144:2688144268814426897001557Sphaerochaeta pleomorpha str. Grapes chromosome, complete genometransposase3e-1065.5
NC_020260:882307:903547903547904272726Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-1064.3
NC_014121:3776902:378244637824463783171726Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative integrase7e-1063.9
CP002797:4603787:462016746201674620514348Escherichia coli NA114, complete genomePutative transposase3e-0962.4
NC_010660:86445:913979139791819423Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-0962.4
NC_008789:1393526:1413395141339514149271533Halorhodospira halophila SL1, complete genomeIntegrase, catalytic region6e-0961.2
NC_014842:19411:2227522275238071533Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceIntegrase catalytic region1e-0860.5
NC_015737:2691246:269832526983252698525201Clostridium sp. SY8519, complete genomehypothetical protein2e-0859.3
NC_017219:538864:5680795680795694341356Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transposase4e-0858.2
NC_011593:533884:5682865682865696411356Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Integrase, catalytic region4e-0858.2
NC_014638:56500:847508475085271522Bifidobacterium bifidum PRL2010 chromosome, complete genomeIS3 family transposase1e-0757
NC_008526:1973500:1982346198234619839951650Lactobacillus casei ATCC 334, complete genomeTransposase2e-0755.8
NC_014500:1862000:1898820189882019003551536Dickeya dadantii 3937 chromosome, complete genometransposase, IS3 family4e-0755.1
NC_014616:54500:7150771507731621656Bifidobacterium bifidum S17 chromosome, complete genometransposase2e-0652.8
NC_015067:998500:100197710019771002198222Bifidobacterium longum subsp. longum JCM 1217, complete genometruncated transposase4e-0652
NC_006625:63342:660336603366506474Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencehypothetical protein7e-0650.8
NC_014500:2688095:270070827007082701493786Dickeya dadantii 3937 chromosome, complete genomeISEch2 OrfB8e-0650.8
NC_017221:1763914:179089017908901791525636Bifidobacterium longum subsp. longum KACC 91563 chromosome,Integrase, catalytic region9e-0650.4