Pre_GI: BLASTN Hits

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Query: NC_015957:9801884 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 9801884, End: 9824182, Length: 22299

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:73773773773776222824492Actinosynnema mirum DSM 43827, complete genome3e-120440BLASTN svgBLASTP svg
NC_015424:748785*74878577389925115Aeromonas veronii B565 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013172:2647716*2647716267284725132Brachybacterium faecium DSM 4810, complete genome8e-25123BLASTN svgBLASTP svg
NC_015514:3351052*3351052338153030479Cellulomonas fimi ATCC 484 chromosome, complete genome2e-149537BLASTN svgBLASTP svg
NC_012590:1004816*1004816102833123516Corynebacterium aurimucosum ATCC 700975, complete genome7e-47196BLASTN svgBLASTP svg
NC_012704:652589*65258967634423756Corynebacterium kroppenstedtii DSM 44385, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_010545:11950*119506085348904Corynebacterium urealyticum DSM 7109, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015565:12835012835015511926770Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete1e-1489.7BLASTN svgBLASTP svg
NC_015656:454500*45450048384529346Frankia symbiont of Datisca glomerata chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013440:31123403112340313738225043Haliangium ochraceum DSM 14365, complete genome1e-20109BLASTN svgBLASTP svg
NC_012803:1552122*1552122157996027839Micrococcus luteus NCTC 2665, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011896:332939*33293935403321095Mycobacterium leprae Br4923, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011896:25399082539908256209922192Mycobacterium leprae Br4923, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002677:332923*33292335401721095Mycobacterium leprae TN, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002677:25399832539983256209922117Mycobacterium leprae TN, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010612:4654936*4654936467312618191Mycobacterium marinum M, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014659:10065001006500103066624167Rhodococcus equi 103S, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_019673:526000*52600056212836129Saccharothrix espanaensis DSM 44229 complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014484:22051302205130223617831049Spirochaeta thermophila DSM 6192 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013947:16659941665994169310927116Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003155:5957657*5957657598116223506Streptomyces avermitilis MA-4680, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003888:45235004523500454956026061Streptomyces coelicolor A3(2), complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010572:45855004585500461328027781Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-19105BLASTN svgBLASTP svg
NC_015953:25121522512152253676224611Streptomyces sp. SirexAA-E chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015953:18609461860946187926918324Streptomyces sp. SirexAA-E chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018750:3141196*3141196316047319278Streptomyces venezuelae ATCC 10712, complete genome01516BLASTN svgBLASTP svg
NC_007516:2277910*2277910233010252193Synechococcus sp. CC9605, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_018870:70590070590073749531596Thermacetogenium phaeum DSM 12270 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014931:23364652336465236070324239Variovorax paradoxus EPS chromosome, complete genome2e-19105BLASTN svgBLASTP svg