Pre_GI: BLASTP Hits

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Query: NC_015733:1680500:1685350 Pseudomonas putida S16 chromosome, complete genome

Start: 1685350, End: 1689132, Length: 3783

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1042642:1053283105328310571283846Pseudomonas putida ND6 chromosome, complete genomeYD repeat-/RHS repeat-containing protein0798
NC_009512:4287605:4295234429523442990793846Pseudomonas putida F1, complete genomeYD repeat-containing protein0797
NC_016830:5109953:5116855511685551215794725Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein0736
NC_010322:1623599:1638966163896616429043939Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein0694
NC_016830:5109953:5131208513120851361844977Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein6e-157555
NC_009512:4287605:4307156430715643123275172Pseudomonas putida F1, complete genomeYD repeat protein2e-132474
NC_010322:1623599:1627462162746216325315070Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein2e-115417
NC_010501:1629107:1634063163406316390394977Pseudomonas putida W619, complete genomeYD repeat protein5e-108393
NC_012214:3502992:3519126351912635240904965Erwinia pyrifoliae Ep1/96, complete genomeNematicidal protein3e-78294
NC_014228:1712339:1716790171679017217544965Xenorhabdus nematophila ATCC 19061, complete genomeputative Nematicidal protein 22e-75285
NC_010694:614985:6149856149856199614977Erwinia tasmaniensis, complete genomeSimilar to Nematicidal protein 28e-73276
NC_009668:46010:5085650856559525097Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceYD repeat-containing protein1e-59232
NC_013892:2108175:2155453215545321598414389Xenorhabdus bovienii SS-2004 chromosome, complete genomeNematicidal protein 27e-37156
NC_010067:4418000:4427234442723444311303897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-29131
NC_009783:1665610:1681367168136716860464680Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-27125
NC_013971:1283942:1297034129703413021245091Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein1e-1690.1
NC_013961:1246454:1259504125950412645945091Erwinia amylovora, complete genomeTeneurin-11e-1689.7
NC_010506:4951500:4969347496934749731503804Shewanella woodyi ATCC 51908, complete genomeYD repeat protein3e-1585.1
NC_015733:1680500:1684093168409316853251233Pseudomonas putida S16 chromosome, complete genomeYD repeat-containing protein8e-1480.5
NC_011899:1969187:1983804198380419906376834Halothermothrix orenii H 168, complete genomeYD repeat protein1e-0966.6
NC_020210:901240:9069919069919135546564Geobacillus sp. GHH01, complete genomecell wall-associated protein2e-0966.2
NC_011567:2468708:2482768248276824880775310Anoxybacillus flavithermus WK1, complete genomeRhs family protein4e-0861.6
NC_007355:4358074:4358074435807443643646291Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein4e-0861.6
NC_014393:4352216:43633464363346437395010605Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein5e-0861.2
NC_006510:1014500:1019616101961610265216906Geobacillus kaustophilus HTA426, complete genomecell wall-associated protein precursor6e-0860.8
NC_006510:795973:8085588085588106392082Geobacillus kaustophilus HTA426, complete genomehypothetical protein6e-0860.8
NC_009012:1:1255512555180775523Clostridium thermocellum ATCC 27405, complete genomeYD repeat containing protein2e-0758.9
NC_007645:5747721:57599405759940577152811589Hahella chejuensis KCTC 2396, complete genomeRhs family protein7e-0757.4
NC_014392:355443:3600883600883675987511Caldicellulosiruptor obsidiansis OB47 chromosome, complete genome6e-0757.4
NC_013971:1283942:1291766129176612968955130Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein1e-0657
NC_013216:3061491:3079669307966930834843816Desulfotomaculum acetoxidans DSM 771, complete genomeYD repeat protein1e-0657
NC_011741:256932:2628582628582670844227Escherichia coli IAI1 chromosome, complete genomeRhsG core protein with extension1e-0656.6
CU928160:256932:2628582628582670844227Escherichia coli IAI1 chromosome, complete genomeRhsG core protein with extension1e-0656.6
NC_011274:1129686:1137806113780611411143309Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91RHS family protein1e-0656.2
NC_016831:1865681:1884050188405018873583309Salmonella enterica subsp. enterica serovar Gallinarum/pullorum1e-0656.2
NC_013961:1246454:1254272125427212593655094Erwinia amylovora, complete genomeProtein rhsC precursor1e-0656.2
NC_009656:4079319:4099703409970341036623960Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-0656.2
NC_009380:336024:3450063450063548279822Salinispora tropica CNB-440 chromosome, complete genomeYD repeat-containing protein2e-0655.8
NC_011741:256932:2705612705612748144254Escherichia coli IAI1 chromosome, complete genomeputative Rhs Core protein2e-0655.8
CU928160:256932:2705612705612748144254Escherichia coli IAI1 chromosome, complete genomePutative Rhs Core protein2e-0655.8
NC_007645:2112622:21126222112622212455211931Hahella chejuensis KCTC 2396, complete genomeRhs family protein5e-0654.7
NC_011660:2756860:2769137276913727758056669Listeria monocytogenes HCC23 chromosome, complete genomeYD repeat protein6e-0654.3
NC_009012:1663357:1671219167121916769725754Clostridium thermocellum ATCC 27405, complete genomeYD repeat protein7e-0653.9
NC_004578:5623783:5636765563676556417745010Pseudomonas syringae pv. tomato str. DC3000, complete genomeYD repeat protein8e-0653.9