Pre_GI: BLASTP Hits

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Query: NC_013929:3953046:3957837 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3957837, End: 3958523, Length: 687

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017186:1320186:132825213282521328836585Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator2e-24112
NC_014318:1320170:132823613282361328820585Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator2e-24112
NC_011749:34056:448344483445460627Escherichia coli UMN026 plasmid p1ESCUM, complete sequenceTetR family transcriptional regulator4e-22104
CU928145:4950723:497335049733504973976627Escherichia coli 55989 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-22104
NC_011748:4950723:497335049733504973976627Escherichia coli 55989, complete genometetracycline repressor protein TetR4e-22104
NC_010939:405477:417091417091417717627Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTetracycline repressor protein class B from transposon Tn104e-22104
NC_003384:157158:179219179219179845627Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtetracycline repressor protein4e-22104
NC_013365:92973:959939599396619627Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTetR family transcriptional regulator4e-22104
NC_017171:280762:286950286950287576627Acinetobacter baumannii MDR-ZJ06 chromosome, complete genometetracycline repressor protein TetR4e-22104
NC_017328:1075535:110734211073421107968627Shigella flexneri 2002017 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-22104
NC_017328:1075535:111874711187471119373627Shigella flexneri 2002017 chromosome, complete genomeTetracycline repressor protein class B from transposon Tn104e-22104
NC_017387:247462:288973288973289599627Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometetracycline repressor protein class G4e-22104
NC_016860:4055117:406437340643734064996624Salmonella enterica subsp. enterica serovar Typhimurium strtetracycline repressor protein TetR4e-22104
NC_020418:448687:458161458161458784624Morganella morganii subsp. morganii KT, complete genomehypothetical protein4e-22104
NC_003888:8613848:861831386183138618951639Streptomyces coelicolor A3(2), complete genomeTetR-family transcriptional regulator2e-21102
NC_009838:81913:908869088691545660Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencehypothetical protein7e-1994
NC_010410:3606826:367271136727113673337627Acinetobacter baumannii AYE, complete genomeTetracycline repressor protein class G7e-1994
NC_012668:3037345:304768430476843048361678Vibrio cholerae MJ-1236 chromosome 1, complete sequencetetracycline repressor8e-1994
NC_011586:268927:291388291388292065678Acinetobacter baumannii AB0057 chromosome, complete genometetracycline repressor protein, class A8e-1994
NC_010410:3606826:364313736431373643814678Acinetobacter baumannii AYE, complete genometetracycline repressor protein8e-1994
NC_010519:1963256:197888119788811979504624Haemophilus somnus 2336 chromosome, complete genomeTetR family transcriptional regulator8e-1787.4
NC_009349:3396:339633964028633Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetetracycline repressor protein TetR(E)3e-1478.6
NC_010617:263985:268936268936269463528Kocuria rhizophila DC2201, complete genomeTetR family transcriptional regulator1e-0860.1
NC_014976:684000:689323689323690003681Bacillus subtilis BSn5 chromosome, complete genomeTranscriptional regulator6e-0754.3
NC_013595:41245:412454124541949705Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family1e-0653.5
NC_016906:3286384:3287341328734132885641224Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative TetR family transcriptional regulator2e-0652.8
NC_003155:622993:634378634378635061684Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator6e-0651.2
NC_016111:986936:100046210004621001124663Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator6e-0650.8