Pre_GI: BLASTP Hits

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Query: NC_012668:1036000:1042430 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 1042430, End: 1044052, Length: 1623

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:2588435:2596912259691225985341623Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein01077
NC_016445:2012294:2020771202077120223931623Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein01077
NC_002505:2537655:2550614255061425522361623Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein01077
NC_009457:2095366:210384621038462104643798Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-141503
NC_009457:2095366:210485621048562105467612Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-115416
NC_014837:33014:4381943819454621644Pantoea sp. At-9b chromosome, complete genomeSMC domain-containing protein2e-52207
NC_015663:1356982:1367997136799713696401644Enterobacter aerogenes KCTC 2190 chromosome, complete genomeSMC domain-containing protein2e-50200
NC_006138:432000:4325504325504338331284Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-49197
NC_008570:2216736:2243181224318122448511671Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeRecF/RecN/SMC family protein6e-47189
NC_013410:3280039:3329681332968133309641284Fibrobacter succinogenes subsp. succinogenes S85 chromosome,SMC domain-containing protein4e-32139
NC_008782:3167440:3196206319620631974261221Acidovorax sp. JS42, complete genomeSMC domain protein2e-30134
NC_008576:4701930:3859385952231365Magnetococcus sp. MC-1, complete genomeATP binding protein3e-29130
NC_013194:3861409:3880836388083638823051470Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeSMC domain protein4e-29129
NC_016863:3905875:3911308391130839124981191Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1ATP-binding protein6e-28125
NC_016860:3964000:3972905397290539740951191Salmonella enterica subsp. enterica serovar Typhimurium strATP-binding protein6e-28125
NC_014616:169311:1903041903041917101407Bifidobacterium bifidum S17 chromosome, complete genomeRecF/RecN/SMC N terminal domain6e-27122
NC_008752:3684739:3712155371215537134681314Acidovorax avenae subsp. citrulli AAC00-1, complete genomeSMC domain protein8e-26119
NC_011566:4709672:4712298471229847135991302Shewanella piezotolerans WP3, complete genomeATPase2e-25117
NC_017068:2055500:2063556206355620648331278Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative ATP binding protein4e-25116
NC_010556:316996:3392073392073405201314Exiguobacterium sibiricum 255-15, complete genomeAAA ATPase4e-24113
NC_015381:1623587:1650399165039916517961398Burkholderia gladioli BSR3 chromosome 1, complete sequenceATP-binding protein7e-24112
NC_015711:3122000:3126744312674431279821239Myxococcus fulvus HW-1 chromosome, complete genomeSMC domain-containing protein8e-24112
NC_003047:536151:5553595553595566901332Sinorhizobium meliloti 1021, complete genomehypothetical protein2e-23110
NC_006513:3486558:3507571350757135088691299Azoarcus sp. EbN1, complete genomehypothetical ATP-binding protein5e-2099.8
NC_016609:6750111:6761634676163467629591326Niastella koreensis GR20-10 chromosome, complete genomeATPase2e-1894.4
NC_007404:2743877:2759441275944127608771437Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein3e-1893.6
NC_015675:5607297:5623994562399456253641371Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAAA ATPase5e-1893.2
NC_015675:5607297:5614345561434556156731329Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP-binding protein involved in virulence9e-1582
NC_013037:1072266:1082487108248710842201734Dyadobacter fermentans DSM 18053, complete genomeSMC domain protein9e-1479
NC_013131:6329438:6349938634993863513321395Catenulispora acidiphila DSM 44928, complete genomeAAA ATPase1e-1275.1
NC_007333:430000:4427574427574438391083Thermobifida fusca YX, complete genomeATPase1e-1172
NC_014394:3114648:3121149312114931230381890Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein2e-1170.9
NC_003888:3602753:3610876361087636121711296Streptomyces coelicolor A3(2), complete genomeATP-binding protein5e-1169.7
NC_015501:1200411:1218974121897412202331260Porphyromonas asaccharolytica DSM 20707 chromosome, completehypothetical protein2e-1067.4
NC_021177:7462000:7471813747181374734561644Streptomyces fulvissimus DSM 40593, complete genomeAAA ATPase3e-1067.4
NC_013446:2961647:2980542298054229823591818Comamonas testosteroni CNB-2, complete genomehypothetical protein4e-0963.5
NC_009663:2363841:2368198236819823700991902Sulfurovum sp. NBC37-1, complete genomehypothetical protein7e-0962.8
NC_012881:1802000:1805995180599518073141320Desulfovibrio salexigens DSM 2638, complete genomeAAA ATPase8e-0962.4
NC_016612:2009927:2025670202567020272891620Klebsiella oxytoca KCTC 1686 chromosome, complete genomeSMC domain-containing protein1e-0862
NC_016812:4246542:4265353426535342671821830Sinorhizobium fredii HH103, complete genomehypothetical protein1e-0861.6
NC_016603:3475843:349137534913753491980606Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomehypothetical protein2e-0861.2
NC_007614:109000:1266151266151279041290Nitrosospira multiformis ATCC 25196 chromosome 1, completeATP-dependent endonuclease of the OLD family-like4e-0757
NC_018691:1322389:1327320132732013286181299Alcanivorax dieselolei B5 chromosome, complete genomeATP-dependent endonuclease of the OLD family-like protein3e-0757
NC_016642:3286654:3294710329471032963021593Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein7e-0755.8
NC_013216:1442044:1469646146964614717842139Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein1e-0655.1
NC_011601:1269500:1279122127912212804951374Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeATP-binding protein4e-0653.5